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Sample GSM108377

Query DataSets for GSM108377

Status

Public on Jun 27, 2006

Title

M010119_A

Sample type

RNA

Source name

culture of cutaneous metastasis of melanoma

Organism

Homo sapiens

Characteristics

Gender: male
Source tissue: cutaneous metastasis of melanoma
Tumor stage: IV
BRAF: wt
NRAS: wt

Extracted molecule

total RNA

Label

biotin

Description

Culture was derived from a cutanous metastasis of melanoma from the left shoulder.

Data processing

MAS5.0

Submission date

May 11, 2006

Last update date

Jun 27, 2006

Contact name

Keith S Hoek

E-mail(s)

[email protected]

URL

http://www.jurmo.ch/work.html

Organization name

Currently unaffilliated

Street address

private

City

Zürich

ZIP/Postal code

8004

Country

Switzerland

Platform ID

GPL96

Series (2)

GSE4840	Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature (Zürich).
GSE4845	Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature.

Data table header descriptions
ID_REF
VALUE	Scaled signal intensity data
ABS_CALL	Detection call: Present (P), Marginal (M) or Absent (A)

Data table
ID_REF	VALUE	ABS_CALL
AFFX-BioB-5_at	337.5	P
AFFX-BioB-M_at	578.7	P
AFFX-BioB-3_at	157.7	P
AFFX-BioC-5_at	729.9	P
AFFX-BioC-3_at	499.9	P
AFFX-BioDn-5_at	698.1	P
AFFX-BioDn-3_at	5306.3	P
AFFX-CreX-5_at	6413.8	P
AFFX-CreX-3_at	9330	P
AFFX-DapX-5_at	19.4	A
AFFX-DapX-M_at	28.8	A
AFFX-DapX-3_at	17.3	A
AFFX-LysX-5_at	6.9	A
AFFX-LysX-M_at	38.5	A
AFFX-LysX-3_at	10.5	A
AFFX-PheX-5_at	4.5	A
AFFX-PheX-M_at	3.3	A
AFFX-PheX-3_at	20.5	A
AFFX-ThrX-5_at	7.7	A
AFFX-ThrX-M_at	30.5	A

Total number of rows: 22283

Table truncated, full table size 400 Kbytes.

Supplementary data files not provided