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Sample GSM108375

Query DataSets for GSM108375

Status

Public on Jun 27, 2006

Title

M000907_A

Sample type

RNA

Source name

culture of cutaneous metastasis of melanoma

Organism

Homo sapiens

Characteristics

Gender: female
Source tissue: cutaneous metastasis of melanoma
Tumor stage: IV
BRAF: wt
NRAS: wt

Extracted molecule

total RNA

Label

biotin

Description

Culture was derived from a cutanous metastasis of melanoma from the right shoulder.

Data processing

MAS5.0

Submission date

May 11, 2006

Last update date

Jun 27, 2006

Contact name

Keith S Hoek

E-mail(s)

[email protected]

URL

http://www.jurmo.ch/work.html

Organization name

Currently unaffilliated

Street address

private

City

Zürich

ZIP/Postal code

8004

Country

Switzerland

Platform ID

GPL96

Series (2)

GSE4840	Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature (Zürich).
GSE4845	Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature.

Data table header descriptions
ID_REF
VALUE	Scaled signal intensity data
ABS_CALL	Detection call: Present (P), Marginal (M) or Absent (A)

Data table
ID_REF	VALUE	ABS_CALL
AFFX-BioB-5_at	525.3	P
AFFX-BioB-M_at	1132	P
AFFX-BioB-3_at	467.3	P
AFFX-BioC-5_at	1380.3	P
AFFX-BioC-3_at	1131.6	P
AFFX-BioDn-5_at	1049.1	P
AFFX-BioDn-3_at	7977.7	P
AFFX-CreX-5_at	10692.3	P
AFFX-CreX-3_at	15205	P
AFFX-DapX-5_at	27.4	A
AFFX-DapX-M_at	39.8	A
AFFX-DapX-3_at	7.2	A
AFFX-LysX-5_at	4.6	A
AFFX-LysX-M_at	57.3	A
AFFX-LysX-3_at	14.6	A
AFFX-PheX-5_at	2.9	A
AFFX-PheX-M_at	5.7	A
AFFX-PheX-3_at	20.2	A
AFFX-ThrX-5_at	13.6	A
AFFX-ThrX-M_at	14.5	A

Total number of rows: 22283

Table truncated, full table size 402 Kbytes.

Supplementary data files not provided