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Sample GSM108372

Query DataSets for GSM108372

Status

Public on Jun 27, 2006

Title

M990115_A

Sample type

RNA

Source name

culture of cutaneous metastasis of melanoma

Organism

Homo sapiens

Characteristics

Gender: female
Source tissue: cutaneous metastasis of melanoma
Tumor stage: IV
BRAF: wt
NRAS: wt

Extracted molecule

total RNA

Label

biotin

Description

Culture was derived from a cutanous metastasis of melanoma from under the left breast.

Data processing

MAS5.0

Submission date

May 11, 2006

Last update date

Jun 27, 2006

Contact name

Keith S Hoek

E-mail(s)

[email protected]

URL

http://www.jurmo.ch/work.html

Organization name

Currently unaffilliated

Street address

private

City

Zürich

ZIP/Postal code

8004

Country

Switzerland

Platform ID

GPL96

Series (2)

GSE4840	Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature (Zürich).
GSE4845	Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature.

Data table header descriptions
ID_REF
VALUE	Scaled signal intensity data
ABS_CALL	Detection call: Present (P), Marginal (M) or Absent (A)

Data table
ID_REF	VALUE	ABS_CALL
AFFX-BioB-5_at	476.2	P
AFFX-BioB-M_at	616.1	P
AFFX-BioB-3_at	349.7	P
AFFX-BioC-5_at	1035.8	P
AFFX-BioC-3_at	654	P
AFFX-BioDn-5_at	844.9	P
AFFX-BioDn-3_at	6720.1	P
AFFX-CreX-5_at	9000	P
AFFX-CreX-3_at	13149	P
AFFX-DapX-5_at	20.1	A
AFFX-DapX-M_at	43.2	A
AFFX-DapX-3_at	7.5	A
AFFX-LysX-5_at	35.3	A
AFFX-LysX-M_at	6	A
AFFX-LysX-3_at	26.6	A
AFFX-PheX-5_at	6.3	A
AFFX-PheX-M_at	25.7	A
AFFX-PheX-3_at	19	A
AFFX-ThrX-5_at	9.5	A
AFFX-ThrX-M_at	19.8	A

Total number of rows: 22283

Table truncated, full table size 402 Kbytes.

Supplementary data files not provided