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Sample GSM1017896 Query DataSets for GSM1017896
Status Public on Aug 19, 2013
Title T1023 adh (dataset 3)
Sample type RNA
 
Source name glioblastoma, stem cells, adherent
Organism Homo sapiens
Characteristics tissue: glioblastoma
cell type: stem cells
growth type: adherent
passage: 4
Growth protocol Adherent cells or as neurospheres.
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol.
Scan protocol Standard Illumina scanning protocol.
Description SAMPLE 5
Data processing The data were normalized using quantile normalization with IlluminaGUI in R.
 
Submission date Oct 10, 2012
Last update date Aug 19, 2013
Contact name Wayne George Murrell
E-mail(s) [email protected]
Phone +4723071405
Fax +4723071397
Organization name Oslo University Hospital
Department Institute for Surgical Research
Lab Vilhelm Magnus Laboratory
Street address Sognsvannsveien 20
City Oslo
ZIP/Postal code 0027
Country Norway
 
Platform ID GPL10558
Series (2)
GSE41467 Adult human brain stem cells 3
GSE41470 Expansion of multipotent stem cells from the adult human brain

Data table header descriptions
ID_REF
VALUE Quantile-normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 80.51471 0.07532468
ILMN_2055271 70.06855 0.3324675
ILMN_1736007 85.28362 0.02987013
ILMN_2383229 69.2802 0.3571429
ILMN_1806310 64.28794 0.548052
ILMN_1779670 51.50249 0.8428571
ILMN_1653355 78.07066 0.112987
ILMN_1717783 49.93144 0.8818182
ILMN_1705025 85.30374 0.02987013
ILMN_1814316 70.19057 0.3298701
ILMN_2359168 52.86183 0.8220779
ILMN_1731507 49.64199 0.8935065
ILMN_1787689 52.23225 0.8311688
ILMN_3241953 70.08401 0.3324675
ILMN_1745607 53.11224 0.8155844
ILMN_2136495 49.08151 0.9
ILMN_1668111 78.44058 0.1077922
ILMN_2295559 66.372 0.4688312
ILMN_1735045 119.7258 0
ILMN_1680754 66.24892 0.4727273

Total number of rows: 47321

Table truncated, full table size 1353 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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