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Sample GSM1017892 Query DataSets for GSM1017892
Status Public on Aug 19, 2013
Title H0991 SVZ adh (dataset 3)
Sample type RNA
 
Source name subventricular zone, stem cells, adherent
Organism Homo sapiens
Characteristics gender: female
age: 43
tissue: subventricular zone
cell type: stem cells
growth type: adherent
passage: 4
Growth protocol Adherent cells or as neurospheres.
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol.
Scan protocol Standard Illumina scanning protocol.
Description SAMPLE 1
Data processing The data were normalized using quantile normalization with IlluminaGUI in R.
 
Submission date Oct 10, 2012
Last update date Aug 19, 2013
Contact name Wayne George Murrell
E-mail(s) [email protected]
Phone +4723071405
Fax +4723071397
Organization name Oslo University Hospital
Department Institute for Surgical Research
Lab Vilhelm Magnus Laboratory
Street address Sognsvannsveien 20
City Oslo
ZIP/Postal code 0027
Country Norway
 
Platform ID GPL10558
Series (2)
GSE41467 Adult human brain stem cells 3
GSE41470 Expansion of multipotent stem cells from the adult human brain

Data table header descriptions
ID_REF
VALUE Quantile-normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 81.05996 0.08831169
ILMN_2055271 72.7598 0.3
ILMN_1736007 80.14362 0.0987013
ILMN_2383229 79.77858 0.1038961
ILMN_1806310 68.95609 0.3948052
ILMN_1779670 64.99026 0.5220779
ILMN_1653355 86.46475 0.04155844
ILMN_1717783 46.81228 0.9545454
ILMN_1705025 87.57179 0.03376623
ILMN_1814316 77.70752 0.1545455
ILMN_2359168 68.09489 0.4220779
ILMN_1731507 42.76428 0.9935065
ILMN_1787689 60.55999 0.6584415
ILMN_3241953 301.0635 0
ILMN_1745607 88.55673 0.02987013
ILMN_2136495 46.93409 0.9545454
ILMN_1668111 67.23015 0.4493507
ILMN_2295559 68.69795 0.4
ILMN_1735045 234.7432 0
ILMN_1680754 63.17621 0.587013

Total number of rows: 47321

Table truncated, full table size 1366 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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