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Sample GSM1016378 Query DataSets for GSM1016378
Status Public on Aug 19, 2013
Title H0991 WM Diff (dataset 2)
Sample type RNA
 
Source name White matter, differentiated
Organism Homo sapiens
Characteristics gender: female
age: 43
tissue: brain white matter
cell type: differentiated cells
passage: 2
Growth protocol Tissue: none; stem cells: adherent; differentiated cells: putative differentiation (1% FBS on Collagen IV).
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol.
Scan protocol Standard Illumina scanning protocol.
Description SAMPLE 6
Data processing The data were normalized using quantile normalization with IlluminaGUI in R.
 
Submission date Oct 05, 2012
Last update date Aug 19, 2013
Contact name Wayne George Murrell
E-mail(s) [email protected]
Phone +4723071405
Fax +4723071397
Organization name Oslo University Hospital
Department Institute for Surgical Research
Lab Vilhelm Magnus Laboratory
Street address Sognsvannsveien 20
City Oslo
ZIP/Postal code 0027
Country Norway
 
Platform ID GPL6884
Series (2)
GSE41394 Adult human brain stem cells 2
GSE41470 Expansion of multipotent stem cells from the adult human brain

Data table header descriptions
ID_REF
VALUE Quantile-normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 67.72172 0.7799736
ILMN_2055271 96.3889 0.02766798
ILMN_1736007 76.04988 0.312253
ILMN_2383229 75.43439 0.3372859
ILMN_1806310 70.90405 0.5823452
ILMN_1779670 73.3145 0.4440053
ILMN_1653355 96.32024 0.02766798
ILMN_1717783 62.97762 0.9328063
ILMN_1705025 72.52446 0.4940712
ILMN_1814316 74.74698 0.3768116
ILMN_2359168 76.13065 0.3083004
ILMN_1731507 74.8422 0.3715415
ILMN_1787689 72.35997 0.4953887
ILMN_1745607 127.1305 0.009222661
ILMN_2136495 71.73615 0.5335968
ILMN_1668111 72.69037 0.4822134
ILMN_2295559 72.67426 0.4848485
ILMN_1735045 390.86 0
ILMN_1680754 84.13381 0.1067194
ILMN_2375184 85.81846 0.08959157

Total number of rows: 48803

Table truncated, full table size 1474 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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