|
| Status |
Public on May 22, 2013 |
| Title |
eel sampled in Dessel-Schotel canal [BE9_SC] |
| Sample type |
RNA |
| |
|
| Source name |
Liver of European eel collected during October 2009 in the Dessel-Schotel canal
|
| Organism |
Anguilla anguilla |
| Characteristics |
location: sampled in the Dessel-Schotel canal
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Extracted according to QiAgen RNeasy MiniKit protocol for tissue samples
|
| Label |
Cyanine 3
|
| Label protocol |
Amplified and labeled according to Agilent Low input One-Color Microarray-Based Gene Expression Analysis protocol
|
| |
|
| Hybridization protocol |
Hybridized according to Agilent One-Color Microarray-Based Gene Expression Analysis protocol
|
| Scan protocol |
Array was scanned according to standard Agilent protocol at a resolution of 5 microns modifying default setting to scan the slide twice at two different sensitivity settings (XDRHi 100% and XDRLo 10%)
|
| Description |
liver RNA of Anguilla anguilla
|
| Data processing |
Data processed with FeatureExtraction v9.5 and normalized by quantile normalization of gProcessed signal using R2.6.1 statistical software.
|
| |
|
| Submission date |
Oct 01, 2012 |
| Last update date |
May 22, 2013 |
| Contact name |
Massimo Milan |
| E-mail(s) |
[email protected]
|
| Phone |
+39 0498272941
|
| Organization name |
University of Padova
|
| Department |
Dept. of Department of Public Health, Comparative Pathology,and Veterinary Hygiene
|
| Street address |
Viale dell'Università 16
|
| City |
Legnaro |
| State/province |
PD |
| ZIP/Postal code |
35020 |
| Country |
Italy |
| |
|
| Platform ID |
GPL15124 |
| Series (1) |
| GSE41240 |
An European eel-specific microarray platform was developed to identify genes involved in response to pollutants |
|
