NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1008300 Query DataSets for GSM1008300
Status Public on Oct 30, 2012
Title P6 - NON IRRAD
Sample type RNA
 
Source name whole skin tisue
Organism Homo sapiens
Characteristics patient: P6
group: NON IRRAD
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using RNeasy Micro Kit (Qiagen Valencia, CA) according to manufacturer’s protocol with on-column Dnase digestion
Label biotin
Label protocol GeneChip Affymetrix protocol
 
Hybridization protocol RNA was hybridized to HG U133A 2.0 chips to measure relative gene expression according to manufacturer's protocol
Scan protocol Hewlett-Packard GeneArray Scanner
Description whole skin tisue
Data processing GCRMA (using gcrma package from R/Bioconductor)
 
Submission date Sep 21, 2012
Last update date Oct 30, 2012
Contact name Mayte Suarez-Farinas
E-mail(s) [email protected]
Organization name Mount SinaiSchool of Medicine
Street address 1425 Madison Ave, L2-70C, Box 1077,
City New York
State/province NY
ZIP/Postal code 10075
Country USA
 
Platform ID GPL571
Series (1)
GSE41078 Gene Profiling of Narrow-band UVB-induced Skin Injury Defines Cellular and Molecular Innate Immune Responses

Data table header descriptions
ID_REF
VALUE Normalized Expression values in log-2 scale

Data table
ID_REF VALUE
1007_s_at 8.772999936
1053_at 6.082694826
117_at 5.611268346
121_at 3.553237812
1255_g_at 2.173815525
1294_at 5.852960796
1316_at 4.349519273
1320_at 2.548024028
1405_i_at 8.637119912
1431_at 2.457326499
1438_at 3.739318217
1487_at 6.952115354
1494_f_at 2.173815525
1598_g_at 10.00066429
160020_at 7.771803885
1729_at 6.876450027
177_at 4.647300979
1773_at 2.173815525
179_at 2.173815525
1861_at 6.445222321

Total number of rows: 22277

Table truncated, full table size 497 Kbytes.




Supplementary file Size Download File type/resource
GSM1008300_12_P6_HGU133A_2.0_Traci_030309.CEL.gz 1.8 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap