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Sample GSM1008299 Query DataSets for GSM1008299
Status Public on Oct 30, 2012
Title P8 - 2MED
Sample type RNA
 
Source name whole skin tisue
Organism Homo sapiens
Characteristics patient: P8
group: 2MED
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using RNeasy Micro Kit (Qiagen Valencia, CA) according to manufacturer’s protocol with on-column Dnase digestion
Label biotin
Label protocol GeneChip Affymetrix protocol
 
Hybridization protocol RNA was hybridized to HG U133A 2.0 chips to measure relative gene expression according to manufacturer's protocol
Scan protocol Hewlett-Packard GeneArray Scanner
Description whole skin tisue
Data processing GCRMA (using gcrma package from R/Bioconductor)
 
Submission date Sep 21, 2012
Last update date Oct 30, 2012
Contact name Mayte Suarez-Farinas
E-mail(s) [email protected]
Organization name Mount SinaiSchool of Medicine
Street address 1425 Madison Ave, L2-70C, Box 1077,
City New York
State/province NY
ZIP/Postal code 10075
Country USA
 
Platform ID GPL571
Series (1)
GSE41078 Gene Profiling of Narrow-band UVB-induced Skin Injury Defines Cellular and Molecular Innate Immune Responses

Data table header descriptions
ID_REF
VALUE Normalized Expression values in log-2 scale

Data table
ID_REF VALUE
1007_s_at 7.435473419
1053_at 6.080312412
117_at 6.283807842
121_at 3.125684081
1255_g_at 2.173815525
1294_at 4.096094653
1316_at 3.708427715
1320_at 2.397278383
1405_i_at 5.265299763
1431_at 4.625972462
1438_at 2.409604823
1487_at 7.318069124
1494_f_at 2.173815525
1598_g_at 8.75229466
160020_at 8.299147003
1729_at 6.743949808
177_at 3.252667889
1773_at 2.173815525
179_at 2.173815525
1861_at 5.966485334

Total number of rows: 22277

Table truncated, full table size 497 Kbytes.




Supplementary file Size Download File type/resource
GSM1008299_11_P8_HGU133A_2.0_Traci_030309.CEL.gz 1.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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