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Sample GSM1008294 Query DataSets for GSM1008294
Status Public on Oct 30, 2012
Title P2 - 2MED
Sample type RNA
 
Source name whole skin tisue
Organism Homo sapiens
Characteristics patient: P2
group: 2MED
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using RNeasy Micro Kit (Qiagen Valencia, CA) according to manufacturer’s protocol with on-column Dnase digestion
Label biotin
Label protocol GeneChip Affymetrix protocol
 
Hybridization protocol RNA was hybridized to HG U133A 2.0 chips to measure relative gene expression according to manufacturer's protocol
Scan protocol Hewlett-Packard GeneArray Scanner
Description whole skin tisue
Data processing GCRMA (using gcrma package from R/Bioconductor)
 
Submission date Sep 21, 2012
Last update date Oct 30, 2012
Contact name Mayte Suarez-Farinas
E-mail(s) [email protected]
Organization name Mount SinaiSchool of Medicine
Street address 1425 Madison Ave, L2-70C, Box 1077,
City New York
State/province NY
ZIP/Postal code 10075
Country USA
 
Platform ID GPL571
Series (1)
GSE41078 Gene Profiling of Narrow-band UVB-induced Skin Injury Defines Cellular and Molecular Innate Immune Responses

Data table header descriptions
ID_REF
VALUE Normalized Expression values in log-2 scale

Data table
ID_REF VALUE
1007_s_at 6.670813547
1053_at 6.082694826
117_at 6.75798891
121_at 2.948756425
1255_g_at 2.173815525
1294_at 3.804121868
1316_at 3.640149682
1320_at 2.895742016
1405_i_at 5.336821484
1431_at 2.53472206
1438_at 2.496443707
1487_at 7.045471528
1494_f_at 2.181252135
1598_g_at 7.679903912
160020_at 7.550099003
1729_at 6.770790843
177_at 2.663796233
1773_at 2.173815525
179_at 2.173815525
1861_at 5.654079902

Total number of rows: 22277

Table truncated, full table size 497 Kbytes.




Supplementary file Size Download File type/resource
GSM1008294_6_P2_HGU133A_2.0_Traci_030309.CEL.gz 1.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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