NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1008293 Query DataSets for GSM1008293
Status Public on Oct 30, 2012
Title P5 - NON IRRAD
Sample type RNA
 
Source name whole skin tisue
Organism Homo sapiens
Characteristics patient: P5
group: NON IRRAD
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using RNeasy Micro Kit (Qiagen Valencia, CA) according to manufacturer’s protocol with on-column Dnase digestion
Label biotin
Label protocol GeneChip Affymetrix protocol
 
Hybridization protocol RNA was hybridized to HG U133A 2.0 chips to measure relative gene expression according to manufacturer's protocol
Scan protocol Hewlett-Packard GeneArray Scanner
Description whole skin tisue
Data processing GCRMA (using gcrma package from R/Bioconductor)
 
Submission date Sep 21, 2012
Last update date Oct 30, 2012
Contact name Mayte Suarez-Farinas
E-mail(s) [email protected]
Organization name Mount SinaiSchool of Medicine
Street address 1425 Madison Ave, L2-70C, Box 1077,
City New York
State/province NY
ZIP/Postal code 10075
Country USA
 
Platform ID GPL571
Series (1)
GSE41078 Gene Profiling of Narrow-band UVB-induced Skin Injury Defines Cellular and Molecular Innate Immune Responses

Data table header descriptions
ID_REF
VALUE Normalized Expression values in log-2 scale

Data table
ID_REF VALUE
1007_s_at 8.817797368
1053_at 6.094500778
117_at 5.498495558
121_at 3.556471209
1255_g_at 2.173815525
1294_at 4.756814442
1316_at 4.371981784
1320_at 2.7790185
1405_i_at 5.445678417
1431_at 3.292698788
1438_at 2.964417776
1487_at 7.380057727
1494_f_at 2.173815525
1598_g_at 9.730536133
160020_at 7.428230079
1729_at 6.381460242
177_at 4.583391238
1773_at 2.173815525
179_at 2.173815525
1861_at 6.097620878

Total number of rows: 22277

Table truncated, full table size 497 Kbytes.




Supplementary file Size Download File type/resource
GSM1008293_5_P5_HGU133A_2.0_Traci_030309.CEL.gz 1.8 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap