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Series GSE98879 Query DataSets for GSE98879
Status Public on Mar 07, 2018
Title Epitope mapping of 5 monoclonal antibodies directed against meningococcal factor H binding protein by peptide microarray
Platform organism Neisseria meningitidis serogroup B
Sample organism Homo sapiens
Experiment type Protein profiling by protein array
Summary The aim of the study was to determine the epitope targeted by 5 different HumAbs and the cross-reactivity to linear peptide epitopes of 12 different factor H binding protein (fHbp) variants. The HumAbs were diluted at 1:200 and incubated on a custom PepStar Peptide Microarray platform printed with 363 different peptides.
 
Overall design A panel of 363 peptides (15-mer overlapping peptides with an offset of 4 amino acids) covering the entire sequence of 12 different fHbp variants (1.1, 1.4, 1.13, 1.14, 1.15, 2.16, 2.19, 2.25, 2.77, 3.28, 3.45, NL10A) were printed in triplicate on a custom PepStar Peptide Microarray. Process-control peptide (GGSGGGSDYKDDDDK) and human IgG were distributed in each array copy as controls. HumAbs were profiled for anti-human IgG specific analysis of reactivity to the peptide epitopes
 
Contributor(s) Bartolini E, Bruttini M
Citation(s) 29487324, 31442074
Submission date May 12, 2017
Last update date Jul 25, 2021
Contact name Erika Bartolini
Organization name GSK Vaccines
Department AIMB
Lab Molecular Biology
Street address Via Fiorentina 1
City Siena
State/province Italy
ZIP/Postal code 53100
Country Italy
 
Platforms (1)
GPL23475 JPT PepStarâ„¢ Peptide Microarrays [fHbp]
Samples (5)
GSM2617168 HumAb 1A3
GSM2617170 HumAb 7B10
GSM2617172 HumAb 1G3
This SubSeries is part of SuperSeries:
GSE98883 Epitope mapping of human antibodies directed against 4CmenB protein components
Relations
BioProject PRJNA386496

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE98879_RAW.tar 670.0 Kb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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