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| Status |
Public on Mar 30, 2018 |
| Title |
Analysis of differential gene expression in the Streptococcus sanguinis SK36 treated with sub-inhibitory dose of Ampicillin for 3 time periods. |
| Organism |
Streptococcus sanguinis |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Gene expression profile of the Streptococcus sanguinis SK36 exposed to sub-inhibitory dose (0.125 µg/ml) of Ampicillin for three time periods compared to the untreated strain SK36
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| Overall design |
Experiment: SK36 strains were treated with a sub-inhibitory dose (0.125 µg/ml) of Ampicillin for 10,20,30 minutes. Control strain was untreated. Three biological replicates independently grown and prepared for each time point and control.
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| Contributor(s) |
El-Rami FE, Xu P |
| Citation(s) |
29393020 |
| NIH grant(s) |
| Grant ID |
Grant title |
Affiliation |
Name |
| R01 DE018138 |
Regulation Of Fitness And Virulence In Oral Streptococci |
VIRGINIA COMMONWEALTH UNIVERSITY |
PING XU |
| R01 DE023078 |
Interaction of Colonizer and Pathogen In Oral Biofilm |
VIRGINIA COMMONWEALTH UNIVERSITY |
PING XU |
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| |
| Submission date |
Mar 30, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Fadi Elias El-Rami |
| E-mail(s) |
[email protected]
|
| Organization name |
Virginia Commonwealth University
|
| Department |
Microbiology & Immunology
|
| Lab |
Dr. Ping Xu
|
| Street address |
521 N 11th Str, wood bldg, room 424
|
| City |
Richmond |
| State/province |
VA |
| ZIP/Postal code |
23298 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL22689 |
Illumina HiSeq 2000 (Streptococcus sanguinis) |
|
| Samples (12)
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| Relations |
| BioProject |
PRJNA381005 |
| SRA |
SRP102729 |
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