NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE92608 Query DataSets for GSE92608
Status Public on May 23, 2017
Title Genomic and molecular screenings unveil different mechanisms for acquired resistance to MET inhibitors in lung cancer cells
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Acquired resistance (AR) is a major hurdle in lung cancer treatment and it is an important drawback in tyrosine kinase inhibitors (TKIs)-based therapeutics. In this context, it is important to unravel the molecular determinants underlying this phenomenon. Our results show molecularly different clones arising during AR to the MET-TKI, many of them involving sensitivity to erlotinib, which supports the known biological crosstalk between MET and the HER-family of receptors. We have also identified inactivation of NF2 in one of the erlotinib-resistant clones. Collectively our findings evidence that AR promote the expansion of multiple subclonal populations with distinct genetic and molecular characteristics highlighting the importance of considering combinatorial therapeutics when designing strategies for second-line treatments in TKI-treated lung cancer patients.
 
Overall design The EBC1 cells, which are sensitive to TKIs against MET, were used to generate multiple clones with AR to a MET-TKI. Whole exome sequencing, RNA sequencing and global DNA methylation analysis were used to scrutinize the genetic and molecular characteristics of the resistant cells.
 
Contributor(s) Pros E, Sanchez-Cespedes M
Citation(s) 28396363
Submission date Dec 20, 2016
Last update date Jan 20, 2019
Contact name Sebastian Moran
Organization name IDIBELL
Department PEBC
Street address Av. Gran Via de l'Hospitalet, 199-203
City L'Hospitalet del Llobregat
State/province Barcelona
ZIP/Postal code 08908
Country Spain
 
Platforms (1)
GPL21145 Infinium MethylationEPIC
Samples (7)
GSM2433458 EBC1
GSM2433459 EBC1-V8
GSM2433460 EBC1-PR3
Relations
BioProject PRJNA358149

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE92608_RAW.tar 161.2 Mb (http)(custom) TAR
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap