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Series GSE87472 Query DataSets for GSE87472
Status Public on Mar 16, 2017
Title The EMT-activator Zeb1 is crucial for cellular plasticity and drives metastasis in pancreatic cancer
Organism Mus musculus
Experiment type Expression profiling by array
Summary Depletion of Zeb1 in a KPC-model for pancreatic cancer affected strongly the formation of precursor lesions, tumour grading, invasion and notably metastasis during PDAC progression. In this context, EMT is important for metastasis, but there is variability and specificity (and not redundancy) in the role and function of different EMT-inducing transcription factors.
 
Overall design Primary Tumor cell lines were derived in replicates from pancreatic cancer driven by Pdx1-cre-mediated activation of mutant Kras and p53 (KPC-model) and also from Pdx1-Cre;Zeb1fl/fl with KrasLSL.G12D/+;Tp53LSL.R172H/+;Zeb1fl/fl mice (KPCZ, Zeb1 knockout). The tumor cell lines displayed phenotypes from mesenchymal and epithelial (designated as KPC_E, KPCZ_E or KPC_M). Two epithelial KPC cell lines and two KPCZ cell lines were treated with 5ng/ml TGFβ (KPC_E+TGFβ or KPCZ_E+TGFβ)
 
Contributor(s) Boerries M, Busch H, Krebs A, Stemmler M, Brabletz T
Citation(s) 28414315
Submission date Sep 29, 2016
Last update date Nov 24, 2017
Contact name Hauke Busch
E-mail(s) [email protected]
Phone +49-451-3101-8470
Organization name University of Lübeck
Department Lübeck Institute of Experimental Dermatology
Street address Ratzeburger Allee 160
City Lübeck
State/province Schleswig-Holstein
ZIP/Postal code 23538
Country Germany
 
Platforms (1)
GPL17543 Illumina MouseWG-6 v2.0 R2 expression beadchip
Samples (36)
GSM2332322 KPC_M_701_1
GSM2332323 KPC_M_702_2
GSM2332324 KPC_M_827_1
Relations
BioProject PRJNA344877

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE87472_non_normalized.txt.gz 14.3 Mb (ftp)(http) TXT
Processed data included within Sample table

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