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| Status |
Public on May 11, 2017 |
| Title |
Environment-dependent regulation of spliceosome activity by the LSM2-8 complex in Arabidopsis |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We report the role of LSM2-8 complex in the Arabidopsis tolerance to abiotic stresses. LSM2-8 controls gene expression reprogramming at the post-transcriptional level by promoting the splicing of pre-mRNA. This function is selectively achieved over selected transcripts depending on stress nature.
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| Overall design |
Transcriptomic profiling through RNA-seq of Col-0 and lsm8-1 plants exposed to low temperatures (4ºC, 24h) or high salt conditions (150 mM NaCl, 10h).
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| Contributor(s) |
Carrasco-López C, Hernández-Verdeja T, Perea-Resa C, Abia D, Catalá R, Salinas J |
| Citation(s) |
28482101 |
| |
| Submission date |
Sep 27, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Julio Salinas |
| E-mail(s) |
[email protected]
|
| Organization name |
Centro de Investigaciones Biologicas
|
| Department |
Departamento de Biologia Medioambiental
|
| Lab |
241
|
| Street address |
Ramiro de Maeztu, 9
|
| City |
Madrid |
| ZIP/Postal code |
28040 |
| Country |
Spain |
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| Platforms (1) |
| GPL13222 |
Illumina HiSeq 2000 (Arabidopsis thaliana) |
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| Samples (8)
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| Relations |
| BioProject |
PRJNA344695 |
| SRA |
SRP090526 |
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