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| Status |
Public on Aug 01, 2017 |
| Title |
RNA profiling of sclerotinia-infected leaves of Brassica napus reveals cross talk between redox and hormone pathways |
| Organism |
Brassica napus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Global transcriptome profiling of suceptible and tolerant lines of Brassica napus infected with Sclerotinia sclerotiorum using a petal inoculation method that mimics field conditions.
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| Overall design |
A total of 12 samples were sequenced. Three biological replicates of mock- and ascospore-inocluated leaves in both susceptible (Westar) and tolerant (ZY821) genotypes of B. napus. Samples were sequenced with Illumina HiSeq2000 100bp single-end reads at the Genome Québec Innovation Centre in Montréal, Canada
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| Contributor(s) |
Girard IJ, Tong C, Mao X, Becker M, Huang J, de Kievit T, Fernando D, Liu S, Belmonte M |
| Citation(s) |
29036633 |
| |
| Submission date |
May 17, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Mark Belmonte |
| E-mail(s) |
[email protected]
|
| Organization name |
University of Manitoba
|
| Department |
Biological Sciences
|
| Lab |
Belmonte
|
| Street address |
50 Sifton Road
|
| City |
Winnipeg |
| State/province |
Manitoba |
| ZIP/Postal code |
R3T 2N2 |
| Country |
Canada |
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| Platforms (1) |
| GPL15579 |
Illumina HiSeq 2000 (Brassica napus) |
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| Samples (12)
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| Relations |
| BioProject |
PRJNA321917 |
| SRA |
SRP075294 |
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