|
| Status |
Public on Dec 11, 2015 |
| Title |
LEM-2 ChIP-seq to study chromatin anchoring |
| Organism |
Caenorhabditis elegans |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Chromatin Immunoprecipitation against the nuclear envelope protein LEM-2 to detect association to the nuclear periphery. LEM-2 ChIP was performed on early embryo fixed extracts for wild-type and two mutants that have altered position of a perinuclear chromatin reporter.
|
| |
|
| Overall design |
LEM-2 ChIP on early embryo chromatin extracts of three different genotypes: wild-type, met-2 set-25_delta_delta and cec-4_delta, in two independent biological replicas
|
| |
|
| Contributor(s) |
Gonzalez-Sandoval A, Gaidatzis D |
| Citation(s) |
26607792 |
| |
| Submission date |
Oct 19, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Dimos Gaidatzis |
| E-mail(s) |
[email protected]
|
| Organization name |
Friedrich Miescher Institute
|
| Street address |
Maulbeerstrasse 66
|
| City |
Basel |
| ZIP/Postal code |
4058 |
| Country |
Switzerland |
| |
|
| Platforms (1) |
| GPL18245 |
Illumina HiSeq 2500 (Caenorhabditis elegans) |
|
| Samples (12)
|
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| This SubSeries is part of SuperSeries: |
| GSE74134 |
Perinuclear anchoring of H3K9-methylated chromatin stabilizes induced cell fate |
|
| Relations |
| BioProject |
PRJNA299148 |
| SRA |
SRP064962 |
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