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Series GSE73540 Query DataSets for GSE73540
Status Public on Sep 18, 2016
Title Gene expression breast cancer
Organism Homo sapiens
Experiment type Expression profiling by array
Summary There exists a common deletion polymorphism on the genetic loci of APOBEC3B and this polymorphism exist in ~37% of East Asians and ~7% of Europeans. Germline APOBEC3B deletion has bee27233495n shown to confer modest risk to breast cancer in both East Asian women and women of European descent
We performed expression profiling by array to investigate the significantly differentially expressed genes and enriched gene sets in APOBEC3B-null vs. APOBEC3B breast cancers
 
Overall design This series represents RNA isolated from 28 primary breast cancer patients and 3 normal breast tissues. We aim to investigate the distinguish features between APOBEC3B-null and APOBEC3B breast cancers to identify significantly differentially expressed genes and enriched gene sets
 
Contributor(s) Wen WX, Soo SS
Citation(s) 27233495
Submission date Sep 28, 2015
Last update date Oct 29, 2018
Contact name Wei Xiong Wen
E-mail(s) [email protected]
Phone +60126631369
Organization name Cancer Research Malaysia
Department Breast Cancer Team
Street address No. 1, Jalan SS12/1A
City Subang Jaya
State/province Selangor
ZIP/Postal code 47500
Country Malaysia
 
Platforms (1)
GPL17586 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
Samples (31)
GSM1897470 SD0017-Tumour-copy number 1
GSM1897471 SD0020-Tumour-copy number 2
GSM1897472 SD0028-Tumour-copy number 0
Relations
BioProject PRJNA297241

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE73540_RAW.tar 673.7 Mb (http)(custom) TAR (of CEL)
GSE73540_normalized_signal_with_annotation.txt.gz 8.5 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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