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| Status |
Public on Sep 25, 2015 |
| Title |
Escherichia coli MG1655 gene expression in glucose minimum media |
| Organism |
Escherichia coli |
| Experiment type |
Expression profiling by array
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| Summary |
M9 glucose minimum media were analyzed for RNA expression.
We use this expression information to show that mRNA level correlate with codon efficiency (Boel et al., Nature 2015)
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| Overall design |
Cells were grown in M9 glucose media until an OD600 of 1 for RNA extraction and hybridization on Affymetrix microarrays.
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| Contributor(s) |
Boel G, Hunt JF |
| Citation(s) |
26760206 |
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| Submission date |
Sep 24, 2015 |
| Last update date |
Mar 08, 2019 |
| Contact name |
Gregory Boel |
| E-mail(s) |
[email protected]
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| Organization name |
Columbia University
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| Department |
Biological Sciences
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| Lab |
J.F. Hunt
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| Street address |
1212 Amsterdam Ave.
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| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10027 |
| Country |
USA |
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| Platforms (1) |
| GPL3154 |
[E_coli_2] Affymetrix E. coli Genome 2.0 Array |
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| Samples (1) |
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| Relations |
| BioProject |
PRJNA296910 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE73416_RAW.tar |
1020.0 Kb |
(http)(custom) |
TAR (of CEL, CHP) |
| Processed data included within Sample table |
| Processed data provided as supplementary file |
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