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Series GSE7112 Query DataSets for GSE7112
Status Public on Mar 01, 2007
Title Abscisic acid effect on wild type and the abh1 mutant
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary Analysis of the abh1 mutant Arabidopsis plants following treatment with 50 uM abscisic acid (ABA). ABH1 encodes the large (80kDa) subunit of the nuclear mRNA cap binding complex and affects early ABA signal transduction events (Hugouvieux et al., 2001, Cell 106, 477).
Keywords: stress response
 
Overall design 4 week old wild-type and abh1 plants were mock-treated or treated with 50uM ABA by spraying. After 4 hours, samples were collected. Total RNA from three biological replicates was pooled for each array hybridization. 2 repliclates were performed. cRNA synthesis and hybridizations were performed according to standard Affymetrix procedures. Data analysis was run with Affymetrix Micro Array Suite 5.0
 
Contributor(s) Hugouvieux V, Kuhn JM, Schroeder JI
Citation(s) 18630751
Submission date Feb 22, 2007
Last update date Aug 28, 2018
Contact name Julian Schroeder
E-mail(s) [email protected]
Organization name University of California San Diego
Street address 9500 Gilman Drive
City San Diego
State/province CA
ZIP/Postal code 92093
Country USA
 
Platforms (1)
GPL198 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array
Samples (8)
GSM170896 Col-0 -ABA repl1
GSM170897 Col-0 +ABA repl1
GSM170899 abh1 -ABA repl1
Relations
BioProject PRJNA98419

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE7112_RAW.tar 76.7 Mb (http)(custom) TAR (of CEL, CHP)
Processed data provided as supplementary file

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