|
| Status |
Public on Feb 01, 2016 |
| Title |
Gene expression profile in HIV-1 and HIV-2 infected PBMC |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
|
| Summary |
Analyzed the effects of HIV-1 (MN) and HIV-2 (ROD) infection on the expression of host factors in PBMC at the RNA level using the Agilent Whole Human Genome Oligo Microarray.
|
| |
|
| Overall design |
RNA samples from PBMC isolated from 3 independent donors productively infected with HIV-1 MN or HIV-2 ROD were used to obtain gene expression data from Agilent microarrays.
|
| |
|
| Contributor(s) |
Hewlett I, Devadas K, Biswas S |
| Citation(s) |
26821323 |
| |
| Submission date |
May 05, 2015 |
| Last update date |
Jan 09, 2018 |
| Contact name |
Indira Hewlett |
| E-mail(s) |
[email protected]
|
| Phone |
240-402-9587
|
| Organization name |
CBER/FDA
|
| Department |
DETTD
|
| Lab |
Laboratory of Molecular Virology
|
| Street address |
10903 New Hampshire Ave
|
| City |
Silver Spring |
| State/province |
Maryland |
| ZIP/Postal code |
20993 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL13497 |
Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version) |
|
| Samples (9)
|
| GSM1675621 |
Gene expression without virus Day-7 22-17 |
| GSM1675622 |
Gene expression with HIV-1 Day-7 22-37 |
| GSM1675623 |
Gene expression with HIV-2 Day-7 22-47 |
| GSM1675624 |
Gene expression without virus Day-7 43-17 |
| GSM1675625 |
Gene expression with HIV-1 Day-7 43-37 |
| GSM1675626 |
Gene expression with HIV-2 Day-7 43-47 |
| GSM1675627 |
Gene expression without virus Day-7 P1-7 |
| GSM1675628 |
Gene expression with HIV-1 Day-7 P3-7 |
| GSM1675629 |
Gene expression with HIV-2 Day-7 P4-7 |
|
| Relations |
| BioProject |
PRJNA283117 |
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