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Series GSE68128 Query DataSets for GSE68128
Status Public on Apr 20, 2018
Title Chronic subacute (incl. one subchronic study) exposure of Wistar rats to (non-)carcinogenic compound
Organism Rattus norvegicus
Experiment type Expression profiling by array
Summary The carcinogenic potential of chemicals is currently evaluated with rodent life-time bioassays, which are time consuming, and expensive with respect to cost, number of animals and amount of compound required. For insight into early mechanisms of non-genotoxoc carcinogenesis and for identification of potential early biomarkers of non-genotoxic carcinogenesis, groups of rats were treated with a range of known non-genotoxic carcinogens for a period of 14, 28, or 90 days, and liver tissue was harvested for expression profiling. Control groups were treated with appropriate vehicles.
 
Overall design Male Wistar rats were treated by oral gavage with different nongenotoxic hepatocarcinogens or non-hepatocarcinogens (Pioglitazone, Rosiglitazone) and corresponding vehicle controls. Depending on the administered compound, rats were treated daily for 14 or 28 days and sacrificed one day each after the last treatment for clinical chemistry analysis, histopathological evaluation and molecular profiling of the liver using Affymetrix RaGene_2.0_ST arrays.
 
Contributor(s) Römer M, Ellinger-Ziegelbauer H
Citation(s) 21455306, 24690595
Submission date Apr 21, 2015
Last update date Jul 20, 2018
Contact name Jonathan Moggs
E-mail(s) [email protected]
Organization name Novartis
Street address Fabrikstrasse 2
City Basel
ZIP/Postal code 4056
Country Switzerland
 
Platforms (1)
GPL20091 [RaGene-2_0-st] Affymetrix Rat Gene 2.0 ST Array [ragene20st_Rn_ENST_19.0.0]
Samples (123)
GSM1664245 Liver_CMC_A_14d_rep1
GSM1664246 Liver_CMC_A_14d_rep2
GSM1664247 Liver_CMC_A_14d_rep3
This SubSeries is part of SuperSeries:
GSE68387 IMI MARCAR Project: towards novel biomarkers for cancer risk assessment
Relations
BioProject PRJNA281880

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE68128_RAW.tar 1.0 Gb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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