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Series GSE63979 Query DataSets for GSE63979
Status Public on Dec 10, 2014
Title Analysis of long non-coding RNAs highlights tissue-specific expression patterns and epigenetic profiles in normal and psoriatic skin
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Together with the GSE54456 data, we used in total RNA-seq data from 99 lesional psoriatic, 27 uninvolved psoriatic, and 90 normal skin biopsies and applied computational approaches to identify and characterize expressed lncRNAs.
 
Overall design 7 psoriatic, 27 uninvolved, and 8 normal skin samples
 
Contributor(s) Elder JT, Abecasis GR, Nair RP, Tsoi LC
Citation(s) 25723451, 27992404, 32132203, 38470486
Submission date Dec 09, 2014
Last update date Jun 05, 2024
Contact name Lam Tsoi
E-mail(s) [email protected]
Organization name University of Michigan
Street address Medical Sciences 1 Bldg. 1301 E. Catherine
City Ann Arbor
State/province MI
ZIP/Postal code 48109
Country USA
 
Platforms (1)
GPL9052 Illumina Genome Analyzer (Homo sapiens)
Samples (42)
GSM1561610 M9036_normal
GSM1561611 M9037_normal
GSM1561612 M9048_normal
This SubSeries is part of SuperSeries:
GSE63980 Transcriptomic studies to characterize the gene expression landscape of psoriasis
Relations
BioProject PRJNA269685
SRA SRP050971

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE63979_ReadCount_42samples.txt.gz 1.4 Mb (ftp)(http) TXT
GSE63979_assembly.filtered.gtf.gz 5.1 Mb (ftp)(http) GTF
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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