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Series GSE59632 Query DataSets for GSE59632
Status Public on Mar 09, 2016
Title Transcriptomic differences between euryhaline and stenohaline malaria vector sibling species in response to salinity stress [set1]
Organisms Anopheles merus; Anopheles coluzzii
Experiment type Expression profiling by high throughput sequencing
Summary We use RNA-Seq to investigate gene expression differences in response to saltwater exposure by the larval stages of the obligate freshwater mosquito Anopheles coluzzii (formerly An. gambiae "M" form), and the euryhaline An. merus.
 
Overall design After rearing in freshwater, both young and old larval instars of each species were briefly (6 h) exposed to either saltwater (SW) or freshwater (FW) conditions to test the impact of salinity on mRNA levels.
 
Contributor(s) Uyhelji HA, Cheng C, Besansky NJ
Citation(s) 26945667
Submission date Jul 21, 2014
Last update date May 15, 2019
Contact name Hilary April Uyhelji
Organization name University of Notre Dame
Department Biological Sciences
Street address 317 Galvin Life Science Center
City Notre Dame
State/province IN
ZIP/Postal code 46556
Country USA
 
Platforms (2)
GPL18984 Illumina HiSeq 2000 (Anopheles coluzzii)
GPL18985 Illumina HiSeq 2000 (Anopheles merus)
Samples (32)
GSM1440931 BarcodedLibrary1_G_18h_DI
GSM1440932 BarcodedLibrary2_G_18h_DI
GSM1440933 BarcodedLibrary3_G_18h_DI
This SubSeries is part of SuperSeries:
GSE74820 Transcriptomic differences between euryhaline and stenohaline malaria vector sibling species in response to salinity stress
Relations
BioProject PRJNA255780
SRA SRP044683

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE59632_cpmTMMnorm_filtered.xls.gz 3.1 Mb (ftp)(http) XLS
SRA Run SelectorHelp
Processed data are available on Series record
Raw data are available in SRA

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