|
| Status |
Public on Nov 07, 2014 |
| Title |
Genome-wide view of TGFb/Foxh1 regulation of the early mesendoderm program [ChIP-seq] |
| Organism |
Xenopus tropicalis |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We defined the genome-wide binding regions of Smad2/3 and Foxh1 at mid-gastrula stage Xenopus tropicalis embryos, at which Nodal signaling and Foxh1 are critical in mesendoderm specification program.
|
| |
|
| Overall design |
Binding profile of the TFs Smad2/3 and Foxh1 in gastrula stage (st10.5) Xenopus tropicalis embryos using ChIP-seq approach.
|
| |
|
| Contributor(s) |
Chiu WT, Cho KW |
| Citation(s) |
25359723 |
| |
| Submission date |
Dec 26, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
William Chiu |
| E-mail(s) |
[email protected]
|
| Organization name |
University of California, Irvine
|
| Department |
Developmental and Cell Biology
|
| Lab |
Cho
|
| Street address |
Room 4410 Natural Sciences II
|
| City |
Irvine |
| State/province |
CA |
| ZIP/Postal code |
92697 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL13741 |
Illumina Genome Analyzer IIx (Xenopus (Silurana) tropicalis) |
| GPL15472 |
Illumina HiSeq 2000 (Xenopus (Silurana) tropicalis) |
|
| Samples (5)
|
|
| This SubSeries is part of SuperSeries: |
| GSE53654 |
Genome-wide view of TGFb/Foxh1 regulation of the early mesendoderm program |
|
| Relations |
| BioProject |
PRJNA232589 |
| SRA |
SRP034730 |
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