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Series GSE52029 Query DataSets for GSE52029
Status Public on Jun 04, 2014
Title Genome-wide localization of Trf2 and TBP in Drosophila embryos
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Here we use ChIP-seq in Drosophila embryos to determine the genome-wide binding pattern of TBP and Trf2 using two different antibodies for each factor.
 
Overall design ChIP-seq using anti-Trf2 and anti-TBP antibodies in Drosophila embryos
 
Contributor(s) Wang YL, Chen K, Johnston J, Zeitlinger J, Kadonaga JT, Duttke S, Kassavetis G
Citation(s) 24958592
Submission date Nov 04, 2013
Last update date May 15, 2019
Contact name Julia Zeitlinger
E-mail(s) [email protected]
Organization name Stowers Institute for Medical Research
Lab Zeitlinger Lab
Street address 1000 E 50th St
City Kansas City
State/province MO
ZIP/Postal code 64110
Country USA
 
Platforms (1)
GPL17275 Illumina HiSeq 2500 (Drosophila melanogaster)
Samples (4)
GSM1257808 TBP 517 Antibody
GSM1257809 TBP 518 Antibody
GSM1257810 Trf2 274 Antibody
Relations
BioProject PRJNA226265
SRA SRP032507

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE52029_RAW.tar 398.3 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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