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Series GSE46419 Query DataSets for GSE46419
Status Public on May 11, 2015
Title A novel epigenetic regulated gene and involved in phenotypic switch classifies primary melanomas depending on the aggressiveness grade (Illumina)
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Loss of methylation of a GTPase-activating protein in melanoma mediates higher proliferation, lower migration, and aggressiveness of primary melanomas.
 
Overall design Sequencing of bisulfite converted DNA and array based analysis of melanoma, breast, and colon primary and metastatic related tumorigenic cell lines.
 
Contributor(s) Esteller M, Vizoso M
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Submission date Apr 26, 2013
Last update date Mar 22, 2019
Contact name Manel Esteller
Organization name IDIBELL
Department PEBC
Lab Cancer Epigenetics
Street address Hospital Duran i Reynals Av. Gran Via s/n km, 2.7
City L'Hospitalet de Llobregat
State/province Barcelona
ZIP/Postal code 08908
Country Spain
 
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (6)
GSM1129944 IGR39 (HumanMethylation450 array)
GSM1129945 IGR37 (HumanMethylation450 array)
GSM1129946 MDA-MB-468PT (HumanMethylation450 array)
This SubSeries is part of SuperSeries:
GSE46522 A novel epigenetic regulated gene and involved in phenotypic switch classifies primary melanomas depending on the aggressiveness grade
Relations
BioProject PRJNA200319

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE46419_RAW.tar 183.1 Mb (http)(custom) TAR
GSE46419_methylated_unmethylated_signals.txt.gz 29.7 Mb (ftp)(http) TXT
Processed data included within Sample table

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