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| Status |
Public on Mar 09, 2007 |
| Title |
Analysis of Arabidopsis thaliana gene expression in response to the bacterial pathogen Pseudomonas syringae ES4326 |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by array
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| Summary |
In order to protect themselves from pathogens, plants activate a battery of defense pathways, many of which involve changes in gene expression. We are interested in identifying plant genes that are differentially expressed in response to pathogen exposure, with the ultimate goal of studying the roles of these genes in plant defense.
Keywords: disease response
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| Overall design |
Whole plants are grown in soil, and individual leaves from 3-4 week old plants are injected with a bacterial suspension, or a mock (5mM MgSO4) control. Approximately five leaves are harvested 24 hours after inoculation and used for RNA preparation, labeling and Affymetrix hybridization.
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| Contributor(s) |
Mitra RM, Glazebrook J |
| Citation(s) |
17181774 |
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| Submission date |
Mar 09, 2006 |
| Last update date |
Jun 12, 2017 |
| Contact name |
Raka Mustaphi Mitra |
| Organization name |
University of Minnesota
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| Department |
Plant Biology
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| Lab |
Jane Glazebrook
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| Street address |
1500 Gortner Avenue
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| City |
Saint Paul |
| State/province |
MN |
| ZIP/Postal code |
55108 |
| Country |
USA |
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| Platforms (1) |
| GPL198 |
[ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA94699 |
| Supplementary data files not provided |
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