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Series GSE40408 Query DataSets for GSE40408
Status Public on Dec 01, 2013
Title Imperfect centered miRNA binding sites are common and can mediate functional repression of target mRNAs [microarray]
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Whole transcriptome Identification of direct targets identify a new class of miRNA::mRNA interactions.
 
Overall design HEK293T cells were transfected with biotinylated miRNAs. The miRNAs and target mRNA were pulled down with streptavidin and compared to a mock transfected control.
 
Contributor(s) Cloonan N
Citation(s) 24629056
Submission date Aug 27, 2012
Last update date Aug 13, 2018
Contact name Nicole Cloonan
E-mail(s) [email protected]
Organization name QIMR Berghofer Medical Research Institute
Lab Genomic Biology
Street address 300 Herston Road
City Herston
State/province Queensland
ZIP/Postal code 4006
Country Australia
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (13)
GSM993346 miR-17-5p-iso rep 1
GSM993347 miR-23b rep 1
GSM993348 miR-27a rep 1
This SubSeries is part of SuperSeries:
GSE55059 Imperfect centered miRNA binding sites are common and can mediate functional repression of target mRNAs
Relations
BioProject PRJNA173890

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40408_RAW.tar 26.2 Mb (http)(custom) TAR
GSE40408_non-normalized.txt.gz 3.3 Mb (ftp)(http) TXT
Processed data included within Sample table

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