NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE35011 Query DataSets for GSE35011
Status Public on Mar 06, 2012
Title PPARg agonists induce a white-to-brown fat conversion through stabilization of PRDM16 protein
Organism Mus musculus
Experiment type Expression profiling by array
Summary Brown adipose tissue dissipates energy through heat and functions as a defense against cold and obesity. PPARγ ligands have been shown to induce the browning of white adipocytes; however, the underlying mechanisms remain unclear. Here we show that PPARγ ligands require full agonism to induce a brown fat gene program preferentially in subcutaneous white adipose. These effects require expression of PRDM16, a factor that controls the development of classical brown fat. Depletion of PRDM16 blunts the effects of the PPARγ agonist rosiglitazone on the induced brown fat gene program. Conversely, PRDM16 and rosiglitazone synergistically activate the brown fat gene program in vivo. This synergy is tightly associated with an increased accumulation of PRDM16 protein, due in large measure to an increase in the half-life of the protein in agonist treated cells. Identifying compounds that stabilize PRDM16 protein may represent a novel therapeutic pathway for the treatment of obesity and diabetes.
 
Overall design Microarray analysis of the differentiated inguinal adipocytes expressing sh-scr or sh-PRDM16 in the presence or absence of rosiglitazone (1uM). These samples were profiled using Affymetrix mouse 430A_2 arrays, representing 2 biological replicates for each samples (8 samples in total).
 
Contributor(s) Ohno H, Shinoda K, Spiegelman BM, Kajimura S
Citation(s) 22405074
Submission date Jan 11, 2012
Last update date May 04, 2018
Contact name Kosaku Shinoda
E-mail(s) [email protected]
Phone 415-476-9736
Fax 415-514-2346
URL http://www.diabetes.ucsf.edu/members/shingo-kajimura
Organization name University of California, San Francisco
Department UCSF Diabetes Center and Department of Cell and Tissue Biology
Street address 35 Medical Center Way
City San Francisco
ZIP/Postal code 94143-0669
Country USA
 
Platforms (1)
GPL8321 [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array
Samples (8)
GSM860620 scr-control, biological rep1
GSM860621 scr-control, biological rep2
GSM860622 scr-Rosi, biological rep1
Relations
BioProject PRJNA151167

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE35011_RAW.tar 17.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap