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GEO accession:
Series GSE32071
Query DataSets for GSE32071
Status
Public on Jul 25, 2012
Title
Chromatin remodelers Isw1 and Chd1 maintain chromatin structure during transcription by preventing histone exchange
Platform organisms
Saccharomyces cerevisiae
;
Saccharomyces cerevisiae S288C
Sample organism
Saccharomyces cerevisiae
Experiment type
Genome binding/occupancy profiling by genome tiling array
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
22922743
,
35188579
Submission date
Sep 12, 2011
Last update date
Mar 31, 2022
Contact name
Michaela Smolle
E-mail(s)
[email protected]
Organization name
Stowers Institute for Medical Research
Lab
Workman Lab
Street address
1000 E 50th Street
City
Kansas City
State/province
Missouri
ZIP/Postal code
64110
Country
USA
Platforms (4)
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GPL10930
Agilent-014810 Yeast Whole Genome ChIP-on-Chip Microarray 4x44K (G4493A) [Probe Name version]
GPL13972
Agilent-031697 Yeast 8x60k Tiling Array
GPL15289
Agilent-037746 S. cerevisiae simr_msm_sense_44k
GPL15290
Agilent-037680 S. cerevisiae simr_msm_antisense_44k
Samples (128)
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GSM775491
WT ISW1 Flag-IP Replicate 1
GSM775492
WT ISW1 Flag-IP Replicate 2
GSM775493
WT ISW1 Flag-IP Replicate 3
GSM794521
WT Ioc4 Flag-IP Replicate 1
GSM794522
WT Ioc4 Flag-IP Replicate 2
GSM794523
WT Ioc4 Flag-IP Replicate 3
GSM794524
set2 Ioc4 Flag-IP Replicate 1
GSM794525
set2 Ioc4 Flag-IP Replicate 2
GSM794526
set2 Ioc4 Flag-IP Replicate 3
GSM794527
WT Ioc3 Flag-IP Replicate 1
GSM794528
WT Ioc3 Flag-IP Replicate 2
GSM794529
WT Ioc3 Flag-IP Replicate 3
GSM794530
set2 Ioc3 Flag-IP Replicate 1
GSM794531
set2 Ioc3 Flag-IP Replicate 2
GSM794532
set2 Ioc3 Flag-IP Replicate 3
GSM794533
WT FLAG-H3 IP Replicate 1
GSM794534
WT FLAG-H3 IP Replicate 2
GSM794535
WT FLAG-H3 IP Replicate 3
GSM794536
WT Myc-H3 IP Replicate 1
GSM794537
WT Myc-H3 IP Replicate 2
GSM794538
WT Myc-H3 IP Replicate 3
GSM794539
isw1 FLAG-H3 IP Replicate 1
GSM794540
isw1 FLAG-H3 IP Replicate 2
GSM794541
isw1 FLAG-H3 IP Replicate 3
GSM794542
isw1 Myc-H3 IP Replicate 1
GSM794543
isw1 Myc-H3 IP Replicate 2
GSM794544
isw1 Myc-H3 IP Replicate 3
GSM794545
chd1 FLAG-H3 IP Replicate 1
GSM794546
chd1 FLAG-H3 IP Replicate 2
GSM794547
chd1 FLAG-H3 IP Replicate 3
GSM794548
chd1 Myc-H3 IP Replicate 1
GSM794549
chd1 Myc-H3 IP Replicate 2
GSM794550
chd1 Myc-H3 IP Replicate 3
GSM794551
isw1 chd1 FLAG-H3 IP Replicate 1
GSM794552
isw1 chd1 FLAG-H3 IP Replicate 2
GSM794553
isw1 chd1 FLAG-H3 IP Replicate 3
GSM794554
isw1 chd1 Myc-H3 IP Replicate 1
GSM794555
isw1 chd1 Myc-H3 IP Replicate 2
GSM794556
isw1 chd1 Myc-H3 IP Replicate 3
GSM794557
ioc4 FLAG-H3 IP Replicate 1
GSM794558
ioc4 FLAG-H3 IP Replicate 2
GSM794559
ioc4 FLAG-H3 IP Replicate 3
GSM794560
ioc4 Myc-H3 IP Replicate 1
GSM794561
ioc4 Myc-H3 IP Replicate 2
GSM794562
ioc4 Myc-H3 IP Replicate 3
GSM794563
WT K36me3-IP Replicate 1
GSM794564
WT K36me3-IP Replicate
GSM794565
WT K36me3-IP Replicate 3
GSM794566
isw1 K36me3-IP Replicate 1
GSM794567
isw1 K36me3-IP Replicate 2
GSM794568
isw1 K36me3-IP Replicate 3
GSM794569
chd1 K36me3-IP Replicate 1
GSM794570
chd1 K36me3-IP Replicate 2
GSM794571
chd1 K36me3-IP Replicate 3
GSM794572
WT AcH4-IP Replicate 1
GSM794573
WT AcH4-IP Replicate 2
GSM794574
WT AcH4-IP Replicate 3
GSM794575
isw1 AcH4-IP Replicate 1
GSM794576
isw1 AcH4-IP Replicate 2
GSM794577
isw1 AcH4-IP Replicate 3
GSM794578
chd1 AcH4-IP Replicate 1
GSM794579
chd1 AcH4-IP Replicate 2
GSM794580
chd1 AcH4-IP Replicate 3
GSM794581
WT H3-IP Replicate 1
GSM794582
WT H3-IP Replicate 2
GSM794583
WT H3-IP Replicate 3
GSM794584
isw1 H3-IP Replicate 1
GSM794585
isw1 H3-IP Replicate 2
GSM794586
isw1 H3-IP Replicate 3
GSM794587
chd1 H3-IP Replicate 1
GSM794588
chd1 H3-IP Replicate 2
GSM794589
chd1 H3-IP Replicate 3
GSM892423
isw1 chd1 AcH4-IP Replicate 1
GSM892424
isw1 chd1 AcH4-IP Replicate 2
GSM892425
isw1 chd1 AcH4-IP Replicate 3
GSM892426
set2 AcH4-IP Replicate 1
GSM892427
set2 AcH4-IP Replicate 2
GSM892428
set2 AcH4-IP Replicate 3
GSM892429
isw1 set2 AcH4-IP Replicate 1
GSM892430
isw1 set2 AcH4-IP Replicate 2
GSM892431
isw1 set2 AcH4-IP Replicate 3
GSM892432
chd1 set2 AcH4-IP Replicate 1
GSM892433
chd1 set2 AcH4-IP Replicate 2
GSM892434
chd1 set2 AcH4-IP Replicate 3
GSM892435
isw1 chd1 H3-IP Replicate 1
GSM892436
isw1 chd1 H3-IP Replicate 2
GSM892437
isw1 chd1 H3-IP Replicate 3
GSM892438
set2 H3-IP Replicate 1
GSM892439
set2 H3-IP Replicate 2
GSM892440
set2 H3-IP Replicate 3
GSM892441
isw1 set2 H3-IP Replicate 1
GSM892442
isw1 set2 H3-IP Replicate 2
GSM892443
isw1 set2 H3-IP Replicate 3
GSM892444
chd1 set2 H3-IP Replicate 1
GSM892445
chd1 set2 H3-IP Replicate 2
GSM892446
chd1 set2 H3-IP Replicate 3
GSM892451
WT K56ac-IP Replicate 1
GSM892452
WT K56ac-IP Replicate 2
GSM892453
WT K56ac-IP Replicate 3
GSM892454
isw1 K56ac-IP Replicate 1
GSM892455
isw1 K56ac-IP Replicate 2
GSM892456
isw1 K56ac-IP Replicate 3
GSM892457
chd1 K56ac-IP Replicate 1
GSM892458
chd1 K56ac-IP Replicate 2
GSM892459
chd1 K56ac-IP Replicate 3
GSM892460
isw1 chd1 K56ac-IP Replicate 1
GSM892461
isw1 chd1 K56ac-IP Replicate 2
GSM892462
isw1 chd1 K56ac-IP Replicate 3
GSM892463
WT-197 K56ac-IP Replicate 1
GSM892464
WT-197 K56ac-IP Replicate 2
GSM892465
ISW1[K227R] K56ac-IP Replicate 1
GSM892466
ISW1[K227R] K56ac-IP Replicate 2
GSM892467
ISW1[K227R] K56ac-IP Replicate 3
GSM892468
WT-197 H3-IP Replicate 1
GSM892469
WT-197 H3-IP Replicate 2
GSM892470
WT-197 H3-IP Replicate 3
GSM892471
ISW1[K227R] H3-IP Replicate 1
GSM892472
ISW1[K227R] H3-IP Replicate 2
GSM892473
ISW1[K227R] H3-IP Replicate 3
GSM912628
isw1chd1/WT sense transcripts Replicate 1
GSM912629
isw1chd1/WT sense transcripts Replicate 2
GSM912630
isw1chd1/WT sense transcripts Replicate 3
GSM912631
isw1chd1/WT antisense transcripts Replicate 1
GSM912632
isw1chd1/WT antisense transcripts Replicate 2
GSM912633
isw1chd1/WT antisense transcripts Replicate 3
GSM912660
set2 Isw1 Flag-IP Replicate 1
GSM912661
set2 Isw1 Flag-IP Replicate 2
GSM912662
set2 Isw1 Flag-IP Replicate 3
This SuperSeries is composed of the following SubSeries:
Less...
More...
GSE32042
Isw1 and Chd1 maintain chromatin organization during transcription
GSE32043
Histone exchange in wildtype, isw1, chd1, isw1 chd1 and ioc4 yeast strains
GSE32044
Histone H3 K36me3 in wildtype, isw1 and chd1 yeast strains
GSE32045
Isw1 and Chd1 maintain chromatin organization during transcription [AcH4 data]
GSE36405
Isw1 and Chd1 maintain chromatin organization during transcription [K56ac data]
GSE37158
Isw1 and Chd1 maintain chromatin organization during transcription [isw1 chd1 mutant expression]
Relations
BioProject
PRJNA147595
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Format
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TXT
Supplementary file
Size
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File type/resource
GSE32071_RAW.tar
2.2 Gb
(http)
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TAR (of TXT)
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