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Series GSE31674 Query DataSets for GSE31674
Status Public on Aug 27, 2011
Title Pinot Noir berry transcriptome during ripening.
Organism Vitis vinifera
Experiment type Expression profiling by array
Summary Global gene expression analysis of grapevine cv. Pinot Noir berries during development and ripening. Time-course comparison of samples collected at three developmental stages (stages 33, 34 and 36 according to the modified E-L system, ref: Coombe BG, Aust J Grape Wine Res 1995, 1: 104-110) during three seasons (2003, 2005 and 2006). Data for each of the three seasons were normalized independently within each season, using gcRMA.
PLEXdb (http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, Stefania Pilati. The equivalent experiment is VV11 at PLEXdb.
 
Overall design year: 2003 - developmental stage: UD:0000034 33E-L (3-replications);
year: 2003 - developmental stage: UD:0000035 34E-L (3-replications);
year: 2003 - developmental stage: UD:0000037 36E-L (3-replications);
year: 2005 - developmental stage: UD:0000034 33E-L (3-replications);
year: 2005 - developmental stage: UD:0000035 34E-L (3-replications);
year: 2005 - developmental stage: UD:0000037 36E-L (3-replications);
year: 2006 - developmental stage: UD:0000034 33E-L (3-replications);
year: 2006 - developmental stage: UD:0000035 34E-L (3-replications);
year: 2006 - developmental stage: UD:0000037 36E-L (3-replications)
Web link http://www.plexdb.org/modules/PD_browse/experiment_browser.php?experiment=VV11
 
Contributor(s) Pilati S, Moser C
Citation(s) 18034875
Submission date Aug 25, 2011
Last update date Jun 22, 2017
Contact name PLEXdb Curator, Sudhansu Dash
Organization name Iowa State University
Department Virtual Reality Application Center
Lab PLEXdb
Street address 1023 Crop Genomes Informatics Lab (Iowa State University)
City Ames
State/province IA
ZIP/Postal code 50011
Country USA
 
Platforms (1)
GPL1320 [Vitis_Vinifera] Affymetrix Vitis vinifera (Grape) Genome Array
Samples (27)
GSM786240 year: 2003 - developmental stage: UD:0000034 33E-L - rep1
GSM786241 year: 2003 - developmental stage: UD:0000034 33E-L - rep2
GSM786242 year: 2003 - developmental stage: UD:0000034 33E-L - rep3
Relations
BioProject PRJNA145369

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE31674_RAW.tar 56.0 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
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