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Series GSE31594 Query DataSets for GSE31594
Status Public on Aug 23, 2011
Title short term abiotic stress Cabernet Sauvignon
Organism Vitis vinifera
Experiment type Expression profiling by array
Summary Cabernet Sauvignon plants grown in a hydroponic drip system were treat with 120 mM salt (10:1 NaCl:CaCl), Polyethylene Glycol, cold (5 C) or unstressed. Shoots with leaves were collected at 0, 1, 4, and 8 hours for all treatments, and at 24 hours for all except cold. ****[PLEXdb (http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, Elizabeth Tattersall. The equivalent experiment is VV1 at PLEXdb.]
 
Overall design time: 0 h - treatment: unstressed (3-replications); time: 1 h - treatment: unstressed (3-replications); time: 1 h - treatment: salt (3-replications); time: 1 h - treatment: PEG (3-replications); time: 1 h - treatment: cold (5 C) (3-replications); time: 4 h - treatment: unstressed (3-replications); time: 4 h - treatment: salt (3-replications); time: 4 h - treatment: PEG (3-replications); time: 4 h - treatment: cold (5 C) (3-replications); time: 8 h - treatment: unstressed (3-replications); time: 8 h - treatment: salt (3-replications); time: 8 h - treatment: PEG (3-replications); time: 8 h - treatment: cold (5 C) (3-replications); time: 24 h - treatment: unstressed (3-replications); time: 24 h - treatment: salt (3-replications); time: 24 h - treatment: PEG (3-replications)
Web link http://www.plexdb.org/modules/PD_browse/experiment_browser.php?experiment=VV1
 
Contributor(s) Tattersall E, Cramer G
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Aug 23, 2011
Last update date Jun 22, 2017
Contact name PLEXdb Curator, Sudhansu Dash
Organization name Iowa State University
Department Virtual Reality Application Center
Lab PLEXdb
Street address 1023 Crop Genomes Informatics Lab (Iowa State University)
City Ames
State/province IA
ZIP/Postal code 50011
Country USA
 
Platforms (1)
GPL1320 [Vitis_Vinifera] Affymetrix Vitis vinifera (Grape) Genome Array
Samples (48)
GSM784922 time: 0 h - treatment: unstressed - rep1
GSM784923 time: 0 h - treatment: unstressed - rep2
GSM784924 time: 0 h - treatment: unstressed - rep3
Relations
BioProject PRJNA145567

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE31594_RAW.tar 96.6 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
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