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Series GSE31272 Query DataSets for GSE31272
Status Public on Sep 15, 2015
Title NF-kB activation confers a prolonged event-free-survival in newly diagnosed myeloma patients harboring t(4;14) treated with bortezomib.
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
SNP genotyping by SNP array
Summary NF-kB pathway activation is the hallmark of hematological malignancies.
In multiple myeloma (MM), a large variety of genomic alterations leading to either inactivation of repressor such as TRAF3, CYLD or cIAP1/2 or amplification of activators such as CD40 or NIK collectively contribute to frequently deregulate NF-kB signaling.
In order to evaluate the prognostic impact of NF-kB mutations in MM, we performed a comprehensive analysis of a panel of newly diagnosed patients with cIAP1/2 biallelic deletion. We found that all patients have dysregulated NF-kB pathway and the majority of them presented t(4;14).
Then we analyzed clinical outcome of 37 MM at presentation with t(4;14) and treated with bortezomib according to their NF-kB status. We showed that increase of NF-kB activity confers prolonged event-free survival.
Altogether, our data suggest that NF-kB activation resulting from NF-kB mutations (ie cIAP1/2 deletion) or other mechanisms improves outcome of t(4;14)-positive MM treated with bortezomib.
 
Overall design NF-kB pathway examined for 34 myeloma patients with high resolution genome-wide chip

SUBMITTER_COMMENT: Relevant clinical data are included in the original paper, please read the article.
 
Contributor(s) Magrangeas F, Avet-Loiseau H, Campion L, Guérin C, Gouraud W, Moreau P, Munshi NC, Minvielle S
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Aug 09, 2011
Last update date Nov 27, 2018
Contact name Wilfried Gouraud
Organization name ICO - UMGC
Department Integrated Center of Oncology René Gauducheau
Lab Omics Data Science Unit
Street address bd Jacques Monod
City Saint Herblain
ZIP/Postal code 44805
Country France
 
Platforms (1)
GPL6801 [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
Samples (34)
GSM822329 KMS 28PE
GSM822330 MM_0DQjo
GSM822331 MM_14KBq
Relations
BioProject PRJNA146137

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE31272_RAW.tar 1.7 Gb (http)(custom) TAR (of CEL, TXT)
Processed data included within Sample table
Processed data provided as supplementary file

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