NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE270672 Query DataSets for GSE270672
Status Public on Jul 18, 2024
Title An HSF1-JMJD6-HSP feedback circuit promotes cell adaptation to proteotoxic stress [RNA-Seq]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Heat Shock Factor 1 (HSF1) is best known as the master transcriptional regulator of the heat-shock response (HSR), a conserved adaptive mechanism critical for protein homeostasis (proteostasis). Combining a genome-wide RNAi library with an HSR reporter, we identified JMJD6 as an essential mediator of HSF1 activity. In follow-up studies, we found that JMJD6 is itself a non-canonical transcriptional target of HSF1 which acts as a critical regulator of proteostasis. In a positive feedback circuit, HSF1 binds and promotes JMJD6 expression, which in turn reduces HSP70 R469 monomethylation to disrupt HSP70-HSF1 repressive complexes resulting in enhanced HSF1 activation. Thus, JMJD6 is intricately wired into the proteostasis network where it plays a critical role for cellular adaptation to proteotoxic stress.
 
Overall design Comparative gene expression profiling analysis of RNA-seq data for PC3M cells transfected with siNT or siJMJD6 and PC3M HSF1 KO cell lines treated with either DMSO or MG132 (2.5uM) for 4 hours. Comparative gene expression profiling analysis of RNA-seq data for PC3M cells transfected with siNT or siJMJD6 and exposed to heat shock at 42C for 1h and recovered for 2 hours.
 
Contributor(s) Alasady MJ, Koeva M, Takagishi SR, Segal D, Amici DR, Smith RS, Anse DJ, Lindquist S, Whitesell L, Bartom ET, Taipale M, Mendillo ML
Citation(s) 38985769
Submission date Jun 24, 2024
Last update date Jul 18, 2024
Contact name Marc L Mendillo
E-mail(s) [email protected]
Phone 3125034862
Organization name Northwestern University
Department Biochemistry and Molecular Genetics
Lab Marc Mendillo
Street address 303 East Superior Street Simpson Querrey, 7th Floo
City Chicago
State/province IL
ZIP/Postal code 60611
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (17)
GSM8349795 MA_PC3M_X1_NT_DMSO
GSM8349796 MA_PC3M_X2_NT_DMSO
GSM8349797 MA_PC3M_X1_NT_MG132
Relations
BioProject PRJNA1127665

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE270672_PC3M_siNT_siJ6_BasalvsHS_htseq.normCounts.txt.gz 724.7 Kb (ftp)(http) TXT
GSE270672_PC3M_siNT_siJ6_DMSOvsMG132_htseq.normCounts.txt.gz 648.3 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap