NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE253884 Query DataSets for GSE253884
Status Public on Jun 30, 2024
Title In vivo CRISPR screens for Toxoplasma hyperLOPIT-unassigened proteins_1
Organism Toxoplasma gondii RH
Experiment type Other
Summary We performed in vivo CRISPR screens of Toxoplasma targeting genes with hyperLOPIT-unassigened subcellular localisation during mouse infection.
 
Overall design This Unassigned_1 library targeting 295 genes which consisted 2944 gRNAs targeting hyperLOPIT-unassigened genes together with dispensable and essential control genes.
 
Contributor(s) Tachibana Y, Yamamoto M
Citation(s) 39082802
Submission date Jan 22, 2024
Last update date Sep 29, 2024
Contact name Yuta Tachibana
E-mail(s) [email protected]
Phone +81-6-6879-8333
Organization name Osaka University
Department Research Institute for Microbial Diseases (RIMD)
Lab Department of Immunoparasitology
Street address 3-1, Yamadaoka
City Suita
State/province Osaka
ZIP/Postal code 565-0871
Country Japan
 
Platforms (1)
GPL34114 DNBSEQ-G400 (Toxoplasma gondii RH)
Samples (12)
GSM8029789 unassigned_1_lib
GSM8029790 unassigned_1_P4
GSM8029791 unassigned_1_WT_01
Relations
BioProject PRJNA1067616

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE253884_RAW.tar 190.0 Kb (http)(custom) TAR (of TXT)
GSE253884_unassigned_1_summary.xlsx 407.9 Kb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap