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Series GSE25363 Query DataSets for GSE25363
Status Public on Nov 18, 2010
Title H3K9acS10P (new abcam lot).Kc
Project modENCODE
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by genome tiling array
Summary modENCODE_submission_3009
This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648
Project Goal: We aim to determine the locations of the major histone modifications
For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf
 
Overall design EXPERIMENT TYPE: CHIP-chip. BIOLOGICAL SOURCE: Cell Line: Kc167; Tissue: embryo-derived cell-line; Developmental Stage: late embryonic stage; Genotype: se/e; Sex: Female; NUMBER OF REPLICATES: 4; EXPERIMENTAL FACTORS: Cell Line Kc167; Antibody H3K9acS10P (new abcam lot) (target is H3K9acS10P)
Web link http://www.ncbi.nlm.nih.gov/projects/geo/info/ENCODE.html
 
Contributor(s) Karpen G, Elgin S, Gortchakov A, Shanower G, Tolstorukov M, Kharchenko P, Kuroda M, Pirrotta V, Park P, Minoda A, Riddle N, Schwartz Y, Alekseyenko A, Kennedy C
Citation missing Has this study been published? Please login to update or notify GEO.
BioProject PRJNA63467
Submission date Nov 15, 2010
Last update date Jul 08, 2015
Contact name DCC modENCODE
E-mail(s) [email protected]
Phone 416-673-8579
Organization name Ontario Institute for Cancer Research
Lab modENCODE DCC
Street address MaRS Centre, South Tower, 101 College Street, Suite 800
City Toronto
State/province Ontario
ZIP/Postal code M5G 0A3
Country Canada
 
Platforms (1)
GPL6629 [DM_tiling2_MR] Affymetrix Drosophila Tiling 2.0R Array
Samples (4)
GSM624636 H3K9acS10P (new abcam lot).Kc extraction1_array1
GSM624637 H3K9acS10P (new abcam lot).Kc extraction2_array1
GSM624638 H3K9acS10P (new abcam lot).Kc extraction3_array1

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE25363_RAW.tar 187.0 Mb (http)(custom) TAR (of BEDGRAPH, CEL)
GSE25363_repset.9276756.smoothedM.bedgraph.gz 41.6 Mb (ftp)(http) BEDGRAPH
GSE25363_repset.9276756.smoothedM.clusters.gff3.gz 154.9 Kb (ftp)(http) GFF3
Processed data included within Sample table
Processed data are available on Series record

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