NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE253532 Query DataSets for GSE253532
Status Public on Jan 18, 2024
Title Activating transcription factors Atf3/Atf4 drive early molecular events preceding neural stem cell differentiation and control neuron formation [Short]
Organism Mus musculus
Experiment type Expression profiling by array
Summary The generation of new neurons from neural stem cells is tightly controlled by transcriptional programs. To induce cell fate switches that establish neuronal identities, differentiating neural precursor cells (NPCs) must undergo rapid and dynamic gene expression changes. However, the neuronal fate-determining molecular events that precede NPC differentiation are incompletely understood. Using high temporal resolution transcriptional profiling of adult hippocampal NPC differentiation, we here identified the activating transcription factors Atf3 and Atf4 as early switch regulators that drive NPC fate and control neuron formation. We found that Atf3/4 are rapidly upregulated in NPCs upon induction of differentiation and drive dynamic gene expression changes associated with neurogenesis. Pharmacological and genetic perturbation of Atf4 demonstrated its importance for neuron formation. Sustained overexpression of Atf3 hampered neurogenesis by repressing long non-coding RNA Miat. Our results demonstrate the critical role of an Atf3/Atf4-controlled transcriptional network in driving early molecular events during neurogenesis.
 
Overall design 17 samples from different timepoints after onset of differentiation
 
Contributor(s) Overall RW, Claasen J, Patone G, Hübner N, Kempermann G
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jan 18, 2024
Last update date Jan 19, 2024
Contact name Rupert W Overall
Organization name Humboldt University of Berlin
Street address Philippstraße 13
City Berlin
State/province Berlin
ZIP/Postal code 10115
Country Germany
 
Platforms (1)
GPL17543 Illumina MouseWG-6 v2.0 R2 expression beadchip
Samples (17)
GSM8022666 NPC-30min
GSM8022667 NPC-240min
GSM8022668 NPC-45min
This SubSeries is part of SuperSeries:
GSE253534 Activating transcription factors Atf3/Atf4 drive early molecular events preceding neural stem cell differentiation and control neuron formation
Relations
BioProject PRJNA1066225

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE253532_RAW.tar 35.4 Mb (http)(custom) TAR (of IDAT)

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap