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Series GSE239314 Query DataSets for GSE239314
Status Public on Aug 01, 2023
Title Overexpression of Brassica napus COMT1 in Arabidopsis heightens UV-B-mediated resistance to Plutella xylostella herbivory
Organism Brassica napus
Experiment type Expression profiling by high throughput sequencing
Summary UV-B radiation regulates numerous morphogenic, biochemical and physiological responses in plants, and can stimulate some responses typically associated with other abiotic and biotic stimuli, including invertebrate herbivory. Removal of UV-B from the growing environment of various plant species has been found to increase their susceptibility to consumption by invertebrate pests, however, to date, little research has been conducted to investigate the effects of UV-B on crop susceptibility to field pests. Here, we report findings from a multi-omic and genetic-based study investigating the mechanisms of UV-B-stimulated resistance of the crop, Brassica napus (oilseed rape), to herbivory from an economically important lepidopteran specialist of the Brassicaceae, Plutella xylostella (diamondback moth). The UV-B photoreceptor, UV RESISTANCE LOCUS 8 (UVR8), was not found to mediate resistance to this pest. RNA-Seq and untargeted metabolomics identified components of the sinapate/lignin biosynthetic pathway that were similarly regulated by UV-B and herbivory. Arabidopsis mutants in genes encoding two enzymes in the sinapate/lignin biosynthetic pathway, CAFFEATE O-METHYLTRANSFERASE 1 (COMT1) and ELICITOR-ACTIVATED GENE 3-2 (ELI3-2), retained UV-B-mediated resistance to P. xylostella herbivory. However, overexpression of B. napus COMT1 in Arabidopsis further reduced plant susceptibility to P. xylostella herbivory in a UV-B-dependent manner. These findings demonstrate that overexpression of a component of the sinapate/lignin biosynthetic pathway in a member of the Brassicaceae can enhance UV-B-stimulated resistance to herbivory from P. xylostella.
 
Overall design The experiment was performed at the Glasgow Polyomics Facility (University of Glasgow) using true leaf tissue from 21-day old Brassica napus. Three biological replicates of each treatment were sequenced on a NextSeq™ 500 (Illumina) desktop machine. B. napus treatments and harvested time points were: +UV-B (treatment) or -UV-B (control) conditions, harvested after 4 hours; exogenous application of 4 mL 100µM MeJA (MeJA treatment) or 4mL distilled water (MeJA control); harvested after 4 hours; a 1 h-period of herbivory (herbivory treatment) or no herbivory (herbivory control), followed by 3 hours under -UV-B conditions.
 
Contributor(s) McInnes KJ, van der Hooft JJ, Sharma A, Herzyk P, Hundleby PA, Schoonbeek H, Amtmann A, Ridout C, Jenkins GI
Citation(s) 37505444
Submission date Jul 26, 2023
Last update date Sep 27, 2023
Contact name Kirsty Jamie McInnes
E-mail(s) [email protected]
Organization name Newcastle University
Street address Kings road, newcastle university, newcastle upon tyne, NE1 7RU
City Newcastle Upon Tyne
ZIP/Postal code NE1 7RU
Country United Kingdom
 
Platforms (1)
GPL25850 Illumina NextSeq 500 (Brassica napus)
Samples (12)
GSM7663075 EU-T-41
GSM7663076 EU-T-42
GSM7663077 MC-T-41
Relations
BioProject PRJNA998799

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE239314_MJ_EU.txt.gz 6.7 Mb (ftp)(http) TXT
GSE239314_MJ_MJ-c.txt.gz 6.9 Mb (ftp)(http) TXT
GSE239314_Matrix_read_counts.txt.gz 2.9 Mb (ftp)(http) TXT
GSE239314_WL_Plut.txt.gz 6.9 Mb (ftp)(http) TXT
GSE239314_WL_UV.txt.gz 6.8 Mb (ftp)(http) TXT
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Processed data are available on Series record

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