|
| Status |
Public on Sep 15, 2010 |
| Title |
Chromatin-dependent binding of the S. cerevisiae HMGB protein Nhp6A affects nucleosome dynamics and transcription |
| Organism |
Saccharomyces cerevisiae |
| Experiment type |
Expression profiling by array
Genome binding/occupancy profiling by genome tiling array
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
20844014 |
| |
| Submission date |
Aug 13, 2010 |
| Last update date |
Jan 09, 2016 |
| Contact name |
Noah L. Dowell |
| E-mail(s) |
[email protected]
|
| Organization name |
UCLA
|
| Department |
Biological Chemistry
|
| Street address |
615 Charles E. Young Drive South, BSRB 357
|
| City |
Los Angeles |
| State/province |
CA |
| ZIP/Postal code |
90095 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL7250 |
[Sc03b_MR] Affymetrix GeneChip S. cerevisiae Tiling 1.0R Array |
| GPL7542 |
Agilent-015072 Yeast Oligo Microarray 4x44K G2519F (Feature Number version) |
|
| Samples (15)
|
| GSM578483 |
Nhp6A_P18A_1_and_2_anti-Nhp6 |
| GSM578484 |
Nhp6A_WT_anti_H3_4_and_5 |
| GSM578485 |
del_nhp6_anti_H3_3_and_4 |
| GSM578486 |
Nhp6A_F48A_1_and_2_anti_H3 |
| GSM578921 |
∆nhp6A ∆nhp6B vs Nhp6A ∆nhp6B, replicate 1 |
| GSM578922 |
nhp6A-P18A ∆nhp6B vs Nhp6A ∆nhp6B, replicate 1 |
| GSM578923 |
nhp6A-F48A ∆nhp6B vs Nhp6A ∆nhp6B, replicate 1 |
| GSM578924 |
nhp6A-M29A ∆nhp6B vs Nhp6A ∆nhp6B, replicate 1 |
| GSM578925 |
∆nhp6A ∆nhp6B vs Nhp6A ∆nhp6B, replicate 2 |
| GSM578926 |
nhp6A-P18A ∆nhp6B vs Nhp6A ∆nhp6B, replicate 2 |
| GSM578927 |
nhp6A-F48A ∆nhp6B vs Nhp6A ∆nhp6B, replicate 2 |
| GSM578928 |
nhp6A-M29A ∆nhp6B vs Nhp6A ∆nhp6B, replicate 2 |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE23582 |
Chromatin-dependent binding of the S. cerevisiae HMGB protein Nhp6A affects nucleosome dynamics and transcription [Affymetrix] |
| GSE23607 |
Transcriptional regulation through DNA bending by Nhp6A [Agilent] |
|
| Relations |
| BioProject |
PRJNA129947 |
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