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GEO help: Mouse over screen elements for information. |
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Status |
Public on May 04, 2023 |
Title |
p53 governs an alveolar type 1 differentiation program in lung cancer suppression |
Organism |
Mus musculus |
Experiment type |
Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing
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Summary |
This SuperSeries is composed of the SubSeries listed below.
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Overall design |
Refer to individual Series
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Citation(s) |
37468633 |
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Submission date |
May 04, 2023 |
Last update date |
Aug 07, 2023 |
Contact name |
Laura D Attardi |
E-mail(s) |
[email protected]
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Organization name |
Stanford University
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Lab |
Attardi
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Street address |
269 Campus Drive
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City |
Stanford |
State/province |
CA |
ZIP/Postal code |
94305 |
Country |
USA |
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Platforms (3) |
GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
GPL21103 |
Illumina HiSeq 4000 (Mus musculus) |
GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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Samples (45)
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GSM7295720 |
KT, replicate 1, 10x multiome ATAC-Seq |
GSM7295721 |
KT, replicate 2, 10x multiome ATAC-Seq |
GSM7295722 |
KPT, replicate 1, 10x multiome ATAC-Seq |
GSM7295723 |
KPT, replicate 2, 10x multiome ATAC-Seq |
GSM7295724 |
KFT, replicate 1, 10x multiome ATAC-Seq |
GSM7295725 |
KFT, replicate 2, 10x multiome ATAC-Seq |
GSM7295745 |
KT, replicate 1, 10x multiome RNA-Seq |
GSM7295746 |
KT, replicate 2, 10x multiome RNA-Seq |
GSM7295747 |
KPT, replicate 1, 10x multiome RNA-Seq |
GSM7295748 |
KPT, replicate 2, 10x multiome RNA-Seq |
GSM7295749 |
KFT, replicate 1, 10x multiome RNA-Seq |
GSM7295750 |
KFT, replicate 2, 10x multiome RNA-Seq |
GSM7295751 |
SpcPT, replicate 1, scRNAseq |
GSM7295752 |
SpcPT, replicate 2, scRNAseq |
GSM7295753 |
SpcT, replicate 1, scRNAseq |
GSM7295754 |
SpcT, replicate 2, scRNAseq |
GSM7295755 |
KT, replicate 1, ATAC-seq 1 |
GSM7295756 |
KT, replicate 2, ATAC-seq 1 |
GSM7295757 |
KFT, replicate 1, ATAC-seq 1 |
GSM7295758 |
KFT, replicate 2, ATAC-seq 1 |
GSM7295759 |
KT, replicate 1, ATAC-seq 2 |
GSM7295760 |
KT, replicate 2, ATAC-seq 2 |
GSM7295761 |
KT, replicate 3, ATAC-seq 2 |
GSM7295762 |
KT, replicate 4, ATAC-seq 2 |
GSM7295763 |
KPT, replicate 1, ATAC-seq 2 |
GSM7295764 |
KPT, replicate 2, ATAC-seq 2 |
GSM7295765 |
KPT, replicate 3, ATAC-seq 2 |
GSM7295766 |
KPT, replicate 4, ATAC-seq 2 |
GSM7295767 |
p53-null-CB5211-Ad-Emp |
GSM7295768 |
p53-null-CB5232-Ad-Emp |
GSM7295769 |
p53-null-KB0255-6-Ad-Emp |
GSM7295770 |
p53-wt-CB5061-1-Ad-Cre |
GSM7295771 |
p53-wt-CB5232-Ad-Cre |
GSM7295772 |
p53-wt-KB0081-1-Ad-Cre |
GSM7295773 |
KT, replicate 1, in vivo RNA-seq |
GSM7295774 |
KT, replicate 2, in vivo RNA-seq |
GSM7295775 |
KT, replicate 3, in vivo RNA-seq |
GSM7295776 |
KFT, replicate 1, in vivo RNA-seq |
GSM7295777 |
KFT, replicate 2, in vivo RNA-seq |
GSM7295778 |
KFT, replicate 3, in vivo RNA-seq |
GSM7295779 |
KFT, replicate 4, in vivo RNA-seq |
GSM7295780 |
KPT, replicate 1, in vivo RNA-seq |
GSM7295781 |
KPT, replicate 2, in vivo RNA-seq |
GSM7295782 |
KPT, replicate 3, in vivo RNA-seq |
GSM7295783 |
KPT, replicate 4, in vivo RNA-seq |
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This SuperSeries is composed of the following SubSeries:
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GSE231671 |
p53 governs an alveolar type 1 differentiation program in lung cancer suppression [10x_multiome_ATAC] |
GSE231674 |
p53 governs an alveolar type 1 differentiation program in lung cancer suppression [10x single cell multiomics RNA-Seq] |
GSE231675 |
p53 governs an alveolar type 1 differentiation program in lung cancer suppression [scRNA-Seq] |
GSE231676 |
p53 governs an alveolar type 1 differentiation program in lung cancer suppression [in_vivo_ATAC_seq1] |
GSE231677 |
p53 governs an alveolar type 1 differentiation program in lung cancer suppression [in_vivo_ATAC_seq2] |
GSE231678 |
p53 governs an alveolar type 1 differentiation program in lung cancer suppression [in_vitro_RNA_seq] |
GSE231679 |
p53 governs an alveolar type 1 differentiation program in lung cancer suppression [in_vivo_RNA_seq] |
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Relations |
BioProject |
PRJNA967289 |
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