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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Aug 08, 2023 |
| Title |
Gene expression profile at single cell level of adipocyte progenitors from subcutaneous inguinal adipose depots |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Stromal vascular fraction (SVF) derived from adipose tissue is enriched for adipocyte progenitor cells, it is composed of aheterogeneous populations of cells and cell types. We use single-cell RNA-Sequencing (scRNA-Seq) to deconvolution of cell types in adipocyte progenitors and a general hierarchical structure is emerging.
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| Overall design |
Adipocyte progenitors (CD31- CD45- SVF) of C57BL/6J mouse were isolated by Fluorescence-activated cell sorting (FACS) according to the presence or absence of CD31 and CD45 and analyzed using scRNAseq.
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| Contributor(s) |
Chen M, Feldman B |
| Citation(s) |
37119138 |
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| Submission date |
Feb 20, 2023 |
| Last update date |
Aug 09, 2023 |
| Contact name |
Min Chen |
| E-mail(s) |
[email protected]
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| Phone |
8312018236
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| Organization name |
University of California
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| Street address |
Fourth St.
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| City |
San Francisco |
| State/province |
CA |
| ZIP/Postal code |
94158 |
| Country |
USA |
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| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (3) |
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| Relations |
| BioProject |
PRJNA936838 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE225624_RAW.tar |
295.3 Mb |
(http)(custom) |
TAR (of MTX, TSV) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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