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Series GSE19978 Query DataSets for GSE19978
Status Public on Sep 03, 2010
Title Different gene expressions in root tips between CLE10 and CLE25 treatment
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary Cell–cell communication is critical for tissue and organ development. In plants, secretory CLAVATA3/EMBRYO SURROUNDING REGION-related (CLE) peptides function as intercellular signaling molecules in various aspects of tissue development. However, little is known about intracellular signaling pathways functioning in vascular development downstream of the CLE ligands. To elucidate CLE signaling pathway, we performed GeneChip analysis.
 
Overall design Arabidopsis roots were treated with chemically synthesized CLE10, or CLE25 at 1000 nM for 12 hours. Comparisons between CLE10 and CLE25 treatment will highlight the genes involved in the cause of different effects.
 
Contributor(s) Isu S, Iwamoto K
Citation(s) 20802224
Submission date Jan 21, 2010
Last update date Jun 12, 2017
Contact name Yuki Kondo
E-mail(s) [email protected]
Organization name Kobe University
Department Graduate School of Science
Lab Kondo
Street address 1-1 Rokkodai-cho, Nada-ku
City Kobe
ZIP/Postal code 657-8501
Country Japan
 
Platforms (1)
GPL198 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array
Samples (6)
GSM499296 Root wt CLE10 rep1
GSM499297 Root wt CLE25 rep1
GSM499298 Root wt CLE10 rep2
Relations
BioProject PRJNA120131

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE19978_RAW.tar 13.9 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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