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Series GSE199500 Query DataSets for GSE199500
Status Public on Mar 30, 2022
Title Gene expression in D4 WT and P38α KO uteri
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Differential expression genes were normalized to fragments per kilobase of exon model per million mapped reads (RPKM) using EdgeR package in R with the criteria of fold change significantly greater than 2 or less than 0.5 and P<0.05.
 
Overall design Total RNAs from D4 uteri were extracted by TRIzol and purified by ploy-A before subjected to RNA-Seq. The expression of level of each gene is normalized to RPKM.
 
Contributor(s) Deng W
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Mar 27, 2022
Last update date Mar 30, 2022
Contact name Wenbo Deng
E-mail(s) [email protected]
Phone +86 17850568375
Organization name Xiamen University
Department School of Medicine
Street address Xiang'an Road
City Xiamen
State/province Fujian
ZIP/Postal code 361102
Country China
 
Platforms (1)
GPL23479 BGISEQ-500 (Mus musculus)
Samples (4)
GSM5974231 D4_P38α_ff_1
GSM5974232 D4_P38α_ff_2
GSM5974233 D4_P38α_dd_1
Relations
BioProject PRJNA820452

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE199500_D4_p38_ff_dd_pVal_2.txt.gz 3.2 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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