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Series GSE197864 Query DataSets for GSE197864
Status Public on Jun 02, 2022
Title Maladaptive Positive Feedback Production of ChREBPβ Drives Glucotoxic β-Cell Failure
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary Purpose: Test the role of ChREBPbeta in pancreatic beta cells using tools that distinguish ChREBPalpha and ChREBPbeta and loss and gain of function experiments, confirming its role in glucose toxicity and finding mitigation strategies.
Methods: INS-1 832/13 cells cultured in 2 mM or 11 mM glucose were transduced with adenoviruses expressing GFP as control or ChREBPbeta. After 48 h, RNA was isolated and amplified via the NuGEN Ovation RNA-Seq System V2 prior to RNA sequencing. Human islets from non-diabetic and T2D subjects were transduced with adenovirus ZSGreen and cell sorted. RNA was isolated and subjected to RNAseq.
Results: Overexpression of ChREBPbeta led to increased expression of cell cycle and apoptotic genes and a decrease in beta cell maturity genes. T2D human beta cells expressed an increased ratio of ChREBPbeta to ChREBPalpha compared to non-diabetics.
Conclusions: ChREBPbeta is necessary for adaptive beta cell expansion, but drives glucose toxicity when overexpressed, mimicking the graded effect of Myc overexpression in beta cells.
 
Overall design RNAseq: INS-1 832/13 cells were cultured in 2 or 11 mM glucose transduced with control (GFP) or ChREBPbeta-expressing adenoviruses for 48 h.
 
Contributor(s) Scott DK
Citation(s) 35908073
Submission date Mar 03, 2022
Last update date Aug 16, 2022
Contact name Donald K Scott
E-mail(s) [email protected]
Phone 4129926061
Organization name MSSM
Department Diabetes Obesity and Metabolism Institute
Lab Scott
Street address 1428 Madison Avenue
City New York
State/province New York
ZIP/Postal code 10029
Country USA
 
Platforms (1)
GPL18694 Illumina HiSeq 2500 (Rattus norvegicus)
Samples (12)
GSM5931452 GFP 2 mM a
GSM5931453 GFP 2 mM b
GSM5931454 GFP 2 mM c
Relations
BioProject PRJNA812532

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Supplementary file Size Download File type/resource
GSE197864_GFP_vs_Beta.txt.gz 757.8 Kb (ftp)(http) TXT
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Processed data are available on Series record

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