NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE193731 Query DataSets for GSE193731
Status Public on Jan 14, 2022
Title Comparison of intestinal epithelial transcriptomes of WT and FACI-/- mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary CREB-H is a key transcription factor governing lipid metabolism. Faci (C11orf86) is a novel CREB-H-induced gene preferentially expressed in enterocyte. To explore its physiological function, we compared intestinal epithelial transcriptomes of WT and Faci-/- mice.
 
Overall design The total RNA from the intestinal epithelium of 4-month-old WT and Faci-/- mice (n = 3 per group) was extracted by RNAiso Plus reagent (Takara) and sent to BGI Shenzhen Genomics Institute of for RNA sequencing.
 
Contributor(s) Cheng Y, Kang X
Citation(s) 35093589
Submission date Jan 14, 2022
Last update date Mar 31, 2022
Contact name Yun Cheng
E-mail(s) [email protected]
Organization name The University of Hong Kong
Street address 21 Sassoon Road, Pokfulam
City Hong Kong
State/province Hong Kong
ZIP/Postal code 852
Country China
 
Platforms (1)
GPL23479 BGISEQ-500 (Mus musculus)
Samples (6)
GSM5819484 WT-1
GSM5819485 WT-2
GSM5819486 WT-3
Relations
BioProject PRJNA797429

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE193731_RAW.tar 1.4 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap