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Series GSE189992 Query DataSets for GSE189992
Status Public on Dec 04, 2021
Title RNA_Seq of AGOI_IP long (16:8), short (8:16) day heads
Organism Drosophila melanogaster
Experiment type Expression profiling by high throughput sequencing
Summary Input and IP (AGO1_ab) RNA_seq libraries were prepared from long (2 libraries) and short (1 library) day heads
 
Overall design The heads homogenate was fractioned in input and AGO1 immunoprecipitate. Input and IP was used to generate RNA_seq libraries to compare between long and short day AGO1 related RNAs
 
Contributor(s) Pegoraro M, Tauber E
Citation(s) 35563325
Submission date Dec 02, 2021
Last update date May 25, 2022
Contact name Mirko Pegoraro
E-mail(s) [email protected]
Phone +4401512312175
Organization name Liverpool John Moores University
Department School of Natural Science and Psychology
Lab Evolutionary Epigenetics Lab
Street address Byrom Street
City Liverpool
State/province Liverpool
ZIP/Postal code L33AF
Country United Kingdom
 
Platforms (1)
GPL19132 Illumina NextSeq 500 (Drosophila melanogaster)
Samples (6)
GSM5710949 long day input rep1
GSM5710950 long day input rep2
GSM5710951 long day IP rep1
Relations
BioProject PRJNA785537
SRA SRP348893

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE189992_gene_exp.xlsx 11.3 Mb (ftp)(http) XLSX
GSE189992_genes.fpkm_table.xlsx 2.6 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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