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Series GSE18928 Query DataSets for GSE18928
Status Public on Dec 20, 2010
Title Expression data from 5-week-old Arabidopsis
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary AGO4 plays an important role in RNA-directed DNA methylation (RdDM). RdDM on specific genomic loci have the potential to silence the nearby protein coding gene. We used wild-type La-er and ago4-1 mutant Arabidopsis to identify AGO4-regulated genes.
 
Overall design Five-weeks wild-type and ago4-1 mutant RNA were used for Affymetrix microarrays. Differentially expressed genes were identified to study the role of AGO4 in regulating plant development.
 
Contributor(s) He J, S. Shepard S, Fedorov A, Leisner S
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Submission date Nov 06, 2009
Last update date Jun 12, 2017
Contact name Scott Leisner
E-mail(s) [email protected]
Phone (419) 530-1550
Fax (419) 530-7737
Organization name University of Toledo
Department Biological Sciences
Street address 2801 West Bancroft Street
City Toledo
State/province OH
ZIP/Postal code 43606
Country USA
 
Platforms (1)
GPL198 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array
Samples (4)
GSM468786 wild-type La-er, biological rep1
GSM468787 wild-type La-er, biological rep2
GSM468788 ago4-1, biological rep1
Relations
BioProject PRJNA121035

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE18928_RAW.tar 8.6 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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