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Series GSE181675 Query DataSets for GSE181675
Status Public on Nov 03, 2022
Title Elucidate the role of CD74 in gene transcription regulation by analyzing the genes up or down regulated after 8 hours of activation in human naive B cells.
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary CD74 (invariant chain), expressed on B cells, is directly involved in shaping the B cell repertoire by regulating their survival in health and disease. Binding of its ligand, macrophage migration inhibitory factor (MIF), induces a cascade that results in CD74 intramembrane proteolysis, and the release of the CD74 intracellular domain (CD74-ICD). CD74-ICD translocates to the nucleus where it induces activation of transcription. In the current study, we characterize the transcription regulator activities of CD74 by analysing its ability to alter gene expression in mRNA levels.
 
Overall design Examination of the genes that are being up or down regulated after CD74 cell surface mulecule activation.
 
Contributor(s) Shachar I, David K
Citation(s) 36323260
Submission date Aug 09, 2021
Last update date Nov 03, 2022
Contact name Idit Shachar
Organization name Weizmann Institute
Street address 234 Herzl Street
City Rehovot
ZIP/Postal code POB 26 7610001
Country Israel
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (8)
GSM5509150 1 Activated
GSM5509151 1 Control
GSM5509152 2 Activated
This SubSeries is part of SuperSeries:
GSE181677 B cells after CD74 activation.
Relations
BioProject PRJNA753001
SRA SRP331610

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE181675_Shachar_norm_counts.xlsx 1013.7 Kb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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